C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: suppressor of defective silencing 3 homolog (SDS3, S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000111646 suds3-001 ENSDARG00000073737 7955 + 5:17266480-17284907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000111646
Transcript ID Brain Heart Kidney Muscle
ENSDART00000111646 13.519±9.60 2.920±1.68 16.359±8.72 1.132±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G7 CIL_0007G7_0001 CGP 5:17131328-17284907

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086471 Suds3-201 protein_coding Mus_musculus 0 588
ENSMUST00000166397 Suds3-202 protein_coding Mus_musculus 0 584
ENST00000505831 SUDS3P1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000541591 SUDS3-002 processed_transcript Homo_sapiens 6e-33 145
ENST00000543473 SUDS3-001 protein_coding Homo_sapiens 0 551
ENST00000617540 AC114936.1-201 processed_pseudogene Homo_sapiens 0 303

Loading