C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: suppressor of defective silencing 3 homolog (SDS3, S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000114446 suds3-201 ENSDARG00000073737 7955 + 5:17266499-17284894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000114446
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000114446 7.791±3.36 14.908±11.18 7.462±0.00 0.657±0.00 1.426±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G7 CIL_0007G7_0001 CGP 5:17131328-17284907

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086471 Suds3-201 protein_coding Mus_musculus 0 494
ENSMUST00000166397 Suds3-202 protein_coding Mus_musculus 0 490
ENST00000505831 SUDS3P1-001 processed_pseudogene Homo_sapiens 0 379
ENST00000541591 SUDS3-002 processed_transcript Homo_sapiens 0.0000000003 69
ENST00000543473 SUDS3-001 protein_coding Homo_sapiens 0 420
ENST00000617540 AC114936.1-201 processed_pseudogene Homo_sapiens 3e-40 169

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