C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007GH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023445-ENSDARG00000037537 CGP 7955 23:20122765-20265764
GeneTranscriptPositionBiotype
ENSDARG00000023445 (atp2b3b)
ATPase, Ca++ transporting, plasma membrane 3b 		ENSDART00000092725 (atp2b3b-201) 20126680-20222175 protein_coding
ENSDART00000132424 (atp2b3b-002) 20168095-20172104 processed_transcript
ENSDART00000153828 (atp2b3b-001) 20122765-20241639 protein_coding
ENSDARG00000037537 (fam58a)
family with sequence similarity 58, member A 		ENSDART00000054659 (fam58a-001) 20257506-20265764 protein_coding
ENSDARG00000070868 (C23H1orf192)
cilia and flagella associated protein 126 		ENSDART00000089342 (C23H1orf192-001) 20265670-20270363 protein_coding
ENSDART00000144790 (C23H1orf192-002) 20265879-20267287 retained_intron
CIL_0007GH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000067842-ENSG00000262919 CGP 9606 X:153517676-153600045
GeneTranscriptPositionBiotype
ENSG00000067842 (ATP2B3)
ATPase, Ca++ transporting, plasma membrane 3 		ENST00000263519 (ATP2B3-201) 153536122-153582929 protein_coding
ENST00000349466 (ATP2B3-002) 153517676-153580589 protein_coding
ENST00000359149 (ATP2B3-006) 153536122-153580589 protein_coding
ENST00000370186 (ATP2B3-001) 153517676-153582939 protein_coding
ENST00000393842 (ATP2B3-004) 153532934-153569962 protein_coding
ENST00000460549 (ATP2B3-003) 153556946-153560824 processed_transcript
ENST00000496610 (ATP2B3-005) 153569648-153580569 processed_transcript
ENSG00000260081 (RP11-66N11.8)
 ENST00000562749 (RP11-66N11.8-002) 153599340-153599893 antisense
ENST00000569906 (RP11-66N11.8-001) 153599372-153604353 antisense
ENSG00000262919 (FAM58A)
family with sequence similarity 58, member A 		ENST00000429336 (FAM58A-005) 153588055-153596063 protein_coding
ENST00000440428 (FAM58A-007) 153587932-153599117 protein_coding
ENST00000482182 (FAM58A-011) 153592612-153600045 protein_coding
ENST00000576892 (FAM58A-006) 153587919-153599186 protein_coding
ENST00000614850 (FAM58A-003) 153588163-153599054 protein_coding
ENST00000614851 (FAM58A-004) 153587927-153599031 nonsense_mediated_decay
ENST00000620088 (FAM58A-001) 153587932-153599117 nonsense_mediated_decay
ENST00000621629 (FAM58A-010) 153587932-153599117 nonsense_mediated_decay
ENST00000621817 (FAM58A-009) 153592575-153599116 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GH_0001ENSDARG00000023445ENSDART00000092725ENSDART00000132424ENSDART00000153828ENSDARG00000037537ENSDART00000054659ENSDARG00000070868ENSDART00000089342ENSDART00000144790CIL_0007GH_0002ENSG00000067842ENST00000263519ENST00000349466ENST00000359149ENST00000370186ENST00000393842ENST00000460549ENST00000496610ENSG00000260081ENST00000562749ENST00000569906ENSG00000262919ENST00000429336ENST00000440428ENST00000482182ENST00000576892ENST00000614850ENST00000614851ENST00000620088ENST00000621629ENST00000621817
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GH_0001ENSDARG00000023445ENSDART00000092725ENSDART00000153828ENSDARG00000037537ENSDART00000054659ENSDARG00000070868ENSDART00000089342CIL_0007GH_0002ENSG00000067842ENST00000263519ENST00000359149ENST00000370186ENST00000393842ENST00000496610ENSG00000260081ENST00000562749ENST00000569906ENSG00000262919ENST00000429336ENST00000440428ENST00000482182ENST00000576892ENST00000614850ENST00000614851ENST00000620088ENST00000621629ENST00000621817
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000023445 ENSDART00000092725 N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153828 N/A N/A N/A 60.497±13.45 N/A N/A 0.035±0.01 0.087±0.00 0.067±0.00 N/A 1.273±0.00 N/A N/A N/A
ENSDARG00000037537 ENSDART00000054659 N/A N/A N/A 4.433±1.56 N/A N/A 2.749±0.84 5.408±0.74 0.281±0.00 N/A 0.740±0.00 N/A N/A N/A
ENSDARG00000070868 ENSDART00000089342 N/A N/A N/A 3.676±1.67 N/A N/A 0.843±0.25 1.852±0.45 N/A N/A 0.382±0.00 N/A N/A N/A
ENSDART00000144790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067842 ENST00000263519 N/A 0.022±0.00 N/A 3.593±1.72 0.015±0.01 N/A N/A 0.011±0.00 N/A 0.003±0.00 N/A N/A 0.058±0.02 0.156±0.00
ENST00000349466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000359149 N/A N/A 0.051±0.00 2.960±0.00 N/A N/A N/A N/A N/A N/A N/A 0.218±0.00 N/A N/A
ENST00000370186 N/A N/A N/A 6.101±0.00 N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A 0.063±0.00 0.023±0.00
ENST00000393842 0.006±0.00 N/A N/A N/A N/A 0.048±0.00 N/A N/A 0.168±0.00 N/A N/A 0.026±0.00 N/A 0.167±0.00
ENST00000460549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496610 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A
ENSG00000260081 ENST00000562749 0.794±0.00 0.580±0.00 N/A 2.321±0.00 1.524±0.00 0.588±0.00 0.584±0.00 1.389±0.00 0.564±0.21 1.110±0.00 N/A 0.927±0.53 0.573±0.21 1.046±0.27
ENST00000569906 N/A 0.293±0.00 N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262919 ENST00000429336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.688±0.00 7.909±0.00 2.702±0.00
ENST00000440428 5.259±0.00 7.025±0.00 N/A 3.281±0.75 3.914±0.00 2.092±0.00 6.084±0.00 N/A 4.137±0.00 5.431±0.00 9.741±0.00 5.190±2.49 12.731±2.34 4.829±0.24
ENST00000482182 N/A N/A N/A N/A N/A N/A N/A 0.590±0.00 N/A N/A N/A N/A N/A N/A
ENST00000576892 0.634±0.00 N/A 1.211±0.00 5.444±0.00 2.389±1.49 1.935±0.29 2.483±0.67 N/A 1.040±0.00 1.991±0.64 2.210±0.25 3.677±0.45 6.306±0.00 N/A
ENST00000614850 N/A N/A N/A N/A N/A 2.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614851 N/A N/A N/A N/A N/A 0.950±0.00 N/A 1.016±0.00 N/A 0.318±0.00 N/A 2.982±1.76 N/A N/A
ENST00000620088 N/A 4.525±0.00 N/A 11.626±0.00 3.076±0.00 2.184±0.00 5.927±0.00 9.234±0.00 2.506±0.00 N/A N/A 14.536±0.00 10.552±0.00 2.249±0.00
ENST00000621629 N/A N/A N/A N/A N/A N/A 1.630±0.00 1.504±0.00 N/A N/A N/A 3.084±0.00 5.468±1.41 0.872±0.00
ENST00000621817 N/A N/A 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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