C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393842 ATP2B3-004 ENSG00000067842 9606 + X:153532934-153569962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverOvaryTestisENST00000393842
Transcript ID Adipose Colon Liver Ovary Testis
ENST00000393842 0.006±0.00 0.048±0.00 0.168±0.00 0.026±0.00 0.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V0 CIL_0001V0_0001 CGP X:153494939-153582939
CIL_0007GH CIL_0007GH_0002 CGP X:153517676-153600045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006810 TAS transport
GO:0007596 TAS blood coagulation
GO:0008152 IEA metabolic process
GO:0008219 IEA cell death
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0031982 IDA vesicle
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114479 Atp2b3-002 protein_coding Mus_musculus 0 3208
ENSMUST00000088429 Atp2b3-001 protein_coding Mus_musculus 0 2987
ENSMUST00000033744 Atp2b3-003 protein_coding Mus_musculus 0 2983
ENSMUST00000152831 Atp2b2-002 nonsense_mediated_decay Mus_musculus 0 2553
ENSMUST00000101045 Atp2b2-001 protein_coding Mus_musculus 0 2536
ENSMUST00000089003 Atp2b2-004 protein_coding Mus_musculus 0 2536
ENSMUST00000101044 Atp2b2-003 protein_coding Mus_musculus 0 2004
ENSDART00000092725 atp2b3b-201 protein_coding Danio_rerio 0 1729
ENSDART00000153828 atp2b3b-001 protein_coding Danio_rerio 0 1729
ENSDART00000092726 atp2b2-201 protein_coding Danio_rerio 0 1683
ENSDART00000093117 atp2b3a-002 protein_coding Danio_rerio 0 1467
ENSDART00000090252 atp2b3a-202 protein_coding Danio_rerio 0 1413
ENSMUST00000048953 Atp2b4-201 protein_coding Mus_musculus 0 1153
ENSMUST00000125659 Atp2b4-003 protein_coding Mus_musculus 0 1153
ENSMUST00000165602 Atp2b4-202 protein_coding Mus_musculus 0 1151
ENSMUST00000143567 Atp2b4-001 protein_coding Mus_musculus 0 1151
ENSMUST00000112264 Atp2b4-002 protein_coding Mus_musculus 0 1147
ENSDART00000127791 atp2b4-201 protein_coding Danio_rerio 0 1014
ENSDART00000046122 atp2b4-001 protein_coding Danio_rerio 0 1014
ENSMUST00000135199 Atp2b2-005 retained_intron Mus_musculus 0 544
ENSMUST00000020107 Atp2b1-201 protein_coding Mus_musculus 0 337

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