C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263519 ATP2B3-201 ENSG00000067842 9606 + X:153536122-153582929 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLungPlacentaTestisENST00000263519
Transcript ID Adrenal Brain Breast Kidney Lung Placenta Testis
ENST00000263519 0.022±0.00 3.593±1.72 0.015±0.01 0.011±0.00 0.003±0.00 0.058±0.02 0.156±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V0 CIL_0001V0_0001 CGP X:153494939-153582939
CIL_0007GH CIL_0007GH_0002 CGP X:153517676-153600045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006810 TAS transport
GO:0007596 TAS blood coagulation
GO:0008152 IEA metabolic process
GO:0008219 IEA cell death
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0031982 IDA vesicle
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088429 Atp2b3-001 protein_coding Mus_musculus 0 4632
ENSMUST00000114479 Atp2b3-002 protein_coding Mus_musculus 0 4193
ENSMUST00000033744 Atp2b3-003 protein_coding Mus_musculus 0 4189
ENSMUST00000101044 Atp2b2-003 protein_coding Mus_musculus 0 2124
ENSMUST00000101045 Atp2b2-001 protein_coding Mus_musculus 0 2113
ENSMUST00000089003 Atp2b2-004 protein_coding Mus_musculus 0 2113
ENSDART00000092725 atp2b3b-201 protein_coding Danio_rerio 0 2045
ENSDART00000153828 atp2b3b-001 protein_coding Danio_rerio 0 2045
ENSMUST00000152831 Atp2b2-002 nonsense_mediated_decay Mus_musculus 0 2004
ENSDART00000092726 atp2b2-201 protein_coding Danio_rerio 0 1790
ENSMUST00000165602 Atp2b4-202 protein_coding Mus_musculus 0 1461
ENSMUST00000143567 Atp2b4-001 protein_coding Mus_musculus 0 1461
ENSMUST00000048953 Atp2b4-201 protein_coding Mus_musculus 0 1458
ENSMUST00000125659 Atp2b4-003 protein_coding Mus_musculus 0 1458
ENSMUST00000112264 Atp2b4-002 protein_coding Mus_musculus 0 1454
ENSDART00000127791 atp2b4-201 protein_coding Danio_rerio 0 1397
ENSDART00000046122 atp2b4-001 protein_coding Danio_rerio 0 1397
ENSMUST00000020107 Atp2b1-201 protein_coding Mus_musculus 0 1223
ENSMUST00000135199 Atp2b2-005 retained_intron Mus_musculus 0 545

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