C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000153828 atp2b3b-001 ENSDARG00000023445 7955 - 23:20122765-20241639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000153828
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000153828 60.497±13.45 0.035±0.01 0.087±0.00 0.067±0.00 1.273±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GH CIL_0007GH_0001 CGP 23:20122765-20265764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263519 ATP2B3-201 protein_coding Homo_sapiens 0 2045
ENST00000349466 ATP2B3-002 protein_coding Homo_sapiens 0 2045
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 1424
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 2307
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 1424
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 1857
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 1423
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 1729
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 1423
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 1794
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1439
ENST00000460549 ATP2B3-003 processed_transcript Homo_sapiens 0 294
ENST00000480680 ATP2B2-008 retained_intron Homo_sapiens 0 483

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