C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00088B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs948 VISTA 9606 4:150067205-150668217
GeneTranscriptPositionBiotype
ENSG00000170390 (DCLK2)
doublecortin-like kinase 2 		ENST00000296550 (DCLK2-001) 150078274-150257457 protein_coding
ENST00000302176 (DCLK2-003) 150079028-150257438 protein_coding
ENST00000411937 (DCLK2-002) 150078989-150257438 nonsense_mediated_decay
ENST00000506325 (DCLK2-004) 150079028-150256247 protein_coding
ENST00000507694 (DCLK2-005) 150175443-150198103 processed_transcript
ENSG00000181541 (MAB21L2)
mab-21-like 2 (C. elegans) 		ENST00000317605 (MAB21L2-001) 150581922-150584693 protein_coding
ENSG00000198589 (LRBA)
LPS-responsive vesicle trafficking, beach and anchor containing 		ENST00000357115 (LRBA-002) 150264659-151015497 protein_coding
ENST00000502839 (LRBA-011) 150840540-150848887 protein_coding
ENST00000503716 (LRBA-004) 150264659-150581722 processed_transcript
ENST00000507224 (LRBA-008) 150314723-151015277 protein_coding
ENST00000508396 (LRBA-012) 150683603-150683963 processed_transcript
ENST00000508606 (LRBA-014) 150265566-150302711 protein_coding
ENST00000509835 (LRBA-003) 150264661-150849537 protein_coding
ENST00000510157 (LRBA-010) 150265026-150315634 retained_intron
ENST00000510413 (LRBA-001) 150264531-151015267 protein_coding
ENST00000510841 (LRBA-006) 151012829-151015727 retained_intron
ENST00000513021 (LRBA-013) 150490957-150679667 processed_transcript
ENST00000514435 (LRBA-007) 151012805-151015284 retained_intron
ENST00000515096 (LRBA-009) 150264659-150311369 retained_intron
ENSG00000221235 (AC110813.1)
 ENST00000408308 (AC110813.1-201) 150639756-150639866 miRNA
ENSG00000248521 (RP11-174F8.1)
 ENST00000514501 (RP11-174F8.1-001) 150422645-150423642 processed_pseudogene
CIL_00088B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs948 VISTA 10090 3:86399823-87000905
GeneTranscriptPositionBiotype
ENSMUSG00000028076 (Cd1d1)
CD1d1 antigen 		ENSMUST00000029717 (Cd1d1-001) 86995834-86999441 protein_coding
ENSMUST00000063869 (Cd1d1-002) 86995834-86999309 protein_coding
ENSMUST00000107620 (Cd1d1-005) 86995834-86997947 retained_intron
ENSMUST00000132131 (Cd1d1-004) 86998118-86998954 retained_intron
ENSMUST00000142793 (Cd1d1-003) 86998389-86999341 retained_intron
ENSMUSG00000028078 (Dclk2)
doublecortin-like kinase 2 		ENSMUST00000029719 (Dclk2-201) 86786150-86920884 protein_coding
ENSMUSG00000028080 (Lrba)
LPS-responsive beige-like anchor 		ENSMUST00000107635 (Lrba-201) 86224690-86782693 protein_coding
ENSMUSG00000041750 (Cd1d2)
CD1d2 antigen 		ENSMUST00000041920 (Cd1d2-201) 86986586-86989533 protein_coding
ENSMUSG00000057777 (Mab21l2)
mab-21-like 2 (C. elegans) 		ENSMUST00000077524 (Mab21l2-201) 86545581-86548283 protein_coding
ENSMUSG00000094392 (Gm3788)
predicted gene 3788 		ENSMUST00000119949 (Gm3788-001) 86672033-86672168 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088B_0001ENSG00000170390ENST00000296550ENST00000302176ENST00000411937ENST00000506325ENST00000507694ENSG00000181541ENST00000317605ENSG00000198589ENST00000357115ENST00000502839ENST00000503716ENST00000507224ENST00000508396ENST00000508606ENST00000509835ENST00000510157ENST00000510413ENST00000510841ENST00000513021ENST00000514435ENST00000515096ENSG00000221235ENST00000408308ENSG00000248521ENST00000514501CIL_00088B_0002ENSMUSG00000028076ENSMUST00000029717ENSMUST00000063869ENSMUST00000107620ENSMUST00000132131ENSMUST00000142793ENSMUSG00000028078ENSMUST00000029719ENSMUSG00000028080ENSMUST00000107635ENSMUSG00000041750ENSMUST00000041920ENSMUSG00000057777ENSMUST00000077524ENSMUSG00000094392ENSMUST00000119949
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088B_0001ENSG00000170390ENST00000296550ENST00000302176ENST00000411937ENST00000506325ENST00000507694ENSG00000181541ENST00000317605ENSG00000198589ENST00000357115ENST00000503716ENST00000507224ENST00000509835ENST00000510157ENST00000510413ENSG00000221235ENST00000408308ENSG00000248521ENST00000514501CIL_00088B_0002ENSMUSG00000028076ENSMUST00000029717ENSMUST00000063869ENSMUST00000107620ENSMUST00000132131ENSMUST00000142793ENSMUSG00000028078ENSMUST00000029719ENSMUSG00000028080ENSMUST00000107635ENSMUSG00000041750ENSMUST00000041920ENSMUSG00000057777ENSMUST00000077524ENSMUSG00000094392ENSMUST00000119949
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170390 ENST00000296550 1.302±0.00 0.729±0.00 N/A 5.819±2.49 0.547±0.00 0.766±0.39 1.306±0.76 0.453±0.00 N/A 0.681±0.00 0.193±0.02 1.196±0.86 0.415±0.16 1.326±0.09
ENST00000302176 N/A N/A 0.351±0.00 6.784±0.51 N/A N/A 0.972±0.48 N/A 0.687±0.00 N/A N/A N/A 0.252±0.00 1.457±0.00
ENST00000411937 N/A 0.456±0.00 N/A 4.616±0.00 1.015±0.00 1.355±0.00 1.134±0.00 N/A 0.073±0.00 0.585±0.00 N/A 1.459±0.50 0.557±0.18 0.788±0.39
ENST00000506325 N/A N/A 0.190±0.00 3.238±0.00 0.444±0.00 N/A N/A N/A N/A 0.685±0.00 N/A 0.161±0.00 N/A N/A
ENST00000507694 N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00 N/A 0.571±0.00 N/A N/A N/A
ENSG00000181541 ENST00000317605 0.013±0.00 0.150±0.00 0.530±0.00 0.130±0.06 2.514±2.47 81.815±75.64 0.023±0.00 0.158±0.05 0.460±0.12 0.448±0.28 0.148±0.14 0.128±0.18 0.067±0.06 0.056±0.00
ENSG00000198589 ENST00000357115 0.491±0.00 N/A 1.421±0.00 0.620±0.00 0.503±0.00 4.293±0.00 0.673±0.00 N/A 0.946±0.28 1.237±0.00 N/A 0.439±0.00 N/A 0.869±0.00
ENST00000502839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503716 N/A N/A N/A N/A N/A 2.584±0.00 N/A 2.550±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507224 N/A N/A 8.927±0.00 2.659±0.00 5.504±0.00 9.483±0.00 1.316±0.00 2.326±0.00 7.318±0.00 5.458±0.00 1.169±0.00 4.109±0.00 N/A N/A
ENST00000508396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509835 1.871±0.00 2.854±0.00 N/A 1.349±0.39 2.616±0.32 1.938±0.00 1.429±0.58 5.647±0.00 1.170±0.00 2.096±0.00 0.943±0.00 4.058±1.77 1.231±0.91 4.948±0.29
ENST00000510157 1.888±0.00 5.331±0.00 N/A N/A 2.427±0.00 5.545±0.00 N/A 7.519±0.00 N/A N/A N/A N/A N/A 5.170±0.00
ENST00000510413 N/A 0.932±0.00 N/A N/A N/A 0.643±0.00 2.021±0.00 2.271±0.00 N/A N/A 0.747±0.00 1.814±0.00 0.434±0.00 1.479±0.00
ENST00000510841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221235 ENST00000408308 0.939±0.00 1.635±0.00 N/A 0.944±0.00 0.504±0.00 0.088±0.00 0.467±0.00 2.040±0.00 0.886±0.00 0.217±0.00 0.100±0.00 N/A N/A 1.321±0.00
ENSG00000248521 ENST00000514501 N/A 0.040±0.00 0.050±0.00 0.170±0.00 0.791±0.00 0.442±0.00 0.135±0.00 0.021±0.00 0.255±0.00 0.849±0.00 0.017±0.00 0.124±0.13 N/A 0.058±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028076 ENSMUST00000029717 37.568±26.24 65.196±6.39 0.519±0.18 2.073±1.46 16.723±4.67 1.364±0.38 1.378±1.06 2.373±1.10 42.394±37.06 4.588±1.13 0.263±0.06 7.507±2.95 0.885±0.44 0.270±0.15
ENSMUST00000063869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.567±0.00 N/A N/A N/A
ENSMUST00000107620 N/A N/A N/A 0.980±0.78 N/A 0.599±0.00 0.840±0.00 N/A N/A 1.462±0.00 0.220±0.05 2.113±0.00 0.156±0.00 0.092±0.04
ENSMUST00000132131 N/A N/A N/A 0.508±0.00 N/A N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A N/A
ENSMUST00000142793 144.898±97.90 99.373±16.11 2.545±0.00 5.523±4.28 72.248±7.69 3.722±1.04 1.972±1.22 4.806±1.33 41.028±23.65 7.435±1.24 0.388±0.11 15.854±6.24 1.179±0.32 0.407±0.19
ENSMUSG00000028078 ENSMUST00000029719 0.562±0.27 1.148±0.45 0.440±0.21 32.338±11.74 0.884±0.43 0.868±0.28 0.228±0.11 0.595±0.30 0.399±0.34 0.569±0.18 0.200±0.07 2.004±0.79 0.367±0.26 0.253±0.12
ENSMUSG00000028080 ENSMUST00000107635 3.094±0.93 2.817±0.77 1.743±0.32 1.970±0.78 3.300±0.98 10.618±0.93 1.348±0.74 6.900±2.92 1.801±0.74 3.879±1.01 2.299±0.80 4.515±0.92 2.541±0.33 1.485±0.29
ENSMUSG00000041750 ENSMUST00000041920 0.692±0.45 0.165±0.10 0.007±0.00 0.290±0.14 0.123±0.06 0.087±0.03 0.027±0.00 0.089±0.03 0.175±0.13 0.188±0.07 N/A 0.211±0.11 0.023±0.01 0.025±0.00
ENSMUSG00000057777 ENSMUST00000077524 0.053±0.00 4.958±0.00 N/A 31.489±13.74 0.366±0.03 10.730±2.30 0.138±0.05 0.253±0.12 0.384±0.25 0.195±0.05 0.014±0.01 0.394±0.20 1.480±2.12 0.047±0.00
ENSMUSG00000094392 ENSMUST00000119949 N/A N/A 7.831±0.00 8.111±0.00 N/A N/A N/A N/A N/A N/A 3.013±0.00 73.608±4.22 47.808±56.08 N/A

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