C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5265
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076828 Gm5265-201 ENSMUSG00000058622 10090 - 1:169453528-169453869 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderTestisENSMUST00000076828
Transcript ID Bladder Testis
ENSMUST00000076828 0.009±0.00 0.381±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BK CIL_0009BK_0002 VISTA 1:169043699-169645191
CIL_0008AF CIL_0008AF_0002 VISTA 1:169085394-169686297
CIL_0009CL CIL_0009CL_0002 VISTA 1:169176672-169778007

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0 213
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 449
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 268
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 527
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 473
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 322
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 416
ENST00000572664 EIF1P4-001 processed_pseudogene Homo_sapiens 0 340
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 0 206
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 525
ENST00000600054 EIF1P6-001 unprocessed_pseudogene Homo_sapiens 0 355

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