C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1701 VISTA 9606 18:74434936-75037805
GeneTranscriptPositionBiotype
ENSG00000150656 (CNDP1)
carnosine dipeptidase 1 (metallopeptidase M20 family) 		ENST00000358821 (CNDP1-001) 74534440-74585025 protein_coding
ENST00000578498 (CNDP1-010) 74574764-74576577 processed_transcript
ENST00000582365 (CNDP1-004) 74534602-74587212 protein_coding
ENST00000582461 (CNDP1-011) 74576280-74585011 retained_intron
ENST00000584004 (CNDP1-006) 74567154-74585025 retained_intron
ENST00000584316 (CNDP1-009) 74560963-74576735 nonsense_mediated_decay
ENST00000585136 (CNDP1-008) 74534503-74567321 processed_transcript
ENSG00000187773 (FAM69C)
family with sequence similarity 69, member C 		ENST00000343998 (FAM69C-001) 74434099-74457268 protein_coding
ENST00000400291 (FAM69C-002) 74435728-74457944 protein_coding
ENSG00000215421 (ZNF407)
zinc finger protein 407 		ENST00000299687 (ZNF407-001) 74631020-75065669 protein_coding
ENST00000309902 (ZNF407-201) 74630963-74804624 protein_coding
ENST00000577538 (ZNF407-006) 74631020-74921058 protein_coding
ENST00000579200 (ZNF407-003) 75061282-75065671 retained_intron
ENST00000581829 (ZNF407-005) 74877205-74898443 protein_coding
ENST00000582214 (ZNF407-007) 75060155-75063485 processed_transcript
ENST00000582337 (ZNF407-002) 74597870-74804627 protein_coding
ENST00000584235 (ZNF407-004) 74877198-74905938 protein_coding
ENSG00000264247 (LINC00909)
long intergenic non-protein coding RNA 909 		ENST00000577806 (LINC00909-004) 74593201-74597569 lincRNA
ENST00000580048 (LINC00909-001) 74591774-74597824 lincRNA
ENST00000581192 (LINC00909-002) 74593696-74598508 lincRNA
ENST00000585279 (LINC00909-003) 74593149-74597800 lincRNA
ENSG00000276934 (RP11-231E4.5)
 ENST00000618739 (RP11-231E4.5-001) 74504766-74505248 sense_intronic

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008CN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1701 VISTA 10090 18:84163338-84766317
GeneTranscriptPositionBiotype
ENSMUSG00000024644 (Cndp2)
CNDP dipeptidase 2 (metallopeptidase M20 family) 		ENSMUST00000025546 (Cndp2-201) 84667470-84685633 protein_coding
ENSMUST00000168419 (Cndp2-202) 84667470-84681996 protein_coding
ENSMUSG00000047992 (Fam69c)
family with sequence similarity 69, member C 		ENSMUST00000052501 (Fam69c-001) 84720242-84740436 protein_coding
ENSMUST00000159800 (Fam69c-004) 84720277-84739408 processed_transcript
ENSMUST00000161033 (Fam69c-003) 84720883-84730224 processed_transcript
ENSMUST00000161429 (Fam69c-002) 84720019-84730447 protein_coding
ENSMUSG00000056162 (Cndp1)
carnosine dipeptidase 1 (metallopeptidase M20 family) 		ENSMUST00000070139 (Cndp1-001) 84610509-84650084 protein_coding
ENSMUST00000130579 (Cndp1-003) 84630859-84649946 retained_intron
ENSMUST00000145981 (Cndp1-002) 84628691-84650046 retained_intron
ENSMUSG00000065746 (Gm25005)
predicted gene, 25005 		ENSMUST00000083812 (Gm25005-201) 84742162-84742317 snRNA
ENSMUSG00000089410 (Gm22014)
predicted gene, 22014 		ENSMUST00000158785 (Gm22014-201) 84737102-84737391 misc_RNA
ENSMUSG00000089760 (D030046N08Rik)
RIKEN cDNA D030046N08 gene 		ENSMUST00000162318 (D030046N08Rik-001) 84719004-84720775 processed_transcript
ENSMUSG00000092056 (Gm7289)
predicted gene 7289 		ENSMUST00000168993 (Gm7289-001) 84658932-84659844 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CN_0001ENSG00000150656ENST00000358821ENST00000578498ENST00000582365ENST00000582461ENST00000584004ENST00000584316ENST00000585136ENSG00000187773ENST00000343998ENST00000400291ENSG00000215421ENST00000299687ENST00000309902ENST00000577538ENST00000579200ENST00000581829ENST00000582214ENST00000582337ENST00000584235ENSG00000264247ENST00000577806ENST00000580048ENST00000581192ENST00000585279ENSG00000276934ENST00000618739CIL_0008CN_0002ENSMUSG00000024644ENSMUST00000025546ENSMUST00000168419ENSMUSG00000047992ENSMUST00000052501ENSMUST00000159800ENSMUST00000161033ENSMUST00000161429ENSMUSG00000056162ENSMUST00000070139ENSMUST00000130579ENSMUST00000145981ENSMUSG00000065746ENSMUST00000083812ENSMUSG00000089410ENSMUST00000158785ENSMUSG00000089760ENSMUST00000162318ENSMUSG00000092056ENSMUST00000168993
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CN_0001ENSG00000150656ENST00000358821ENST00000578498ENST00000582365ENST00000582461ENST00000584004ENST00000584316ENSG00000187773ENST00000343998ENST00000400291ENSG00000215421ENST00000299687ENST00000309902ENST00000577538ENST00000582337ENSG00000264247ENST00000577806ENST00000580048ENST00000581192ENST00000585279ENSG00000276934ENST00000618739CIL_0008CN_0002ENSMUSG00000024644ENSMUST00000025546ENSMUST00000168419ENSMUSG00000047992ENSMUST00000052501ENSMUST00000159800ENSMUST00000161429ENSMUSG00000056162ENSMUST00000070139ENSMUST00000130579ENSMUST00000145981ENSMUSG00000065746ENSMUST00000083812ENSMUSG00000089410ENSMUST00000158785ENSMUSG00000089760ENSMUST00000162318ENSMUSG00000092056ENSMUST00000168993
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150656 ENST00000358821 N/A N/A N/A 35.263±23.01 N/A N/A N/A 6.063±5.72 3.631±0.00 N/A N/A N/A N/A 0.200±0.00
ENST00000578498 0.174±0.00 N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A 0.127±0.00 0.210±0.00 N/A N/A N/A
ENST00000582365 0.004±0.00 0.100±0.00 N/A 8.455±5.17 0.081±0.00 N/A 0.018±0.00 0.076±0.00 0.060±0.00 N/A 0.016±0.00 0.025±0.01 0.019±0.00 0.169±0.13
ENST00000582461 0.006±0.00 N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A 0.033±0.00 N/A 0.015±0.01 N/A 0.094±0.00
ENST00000584004 N/A N/A N/A N/A N/A N/A N/A 3.143±2.87 3.200±0.00 N/A 0.031±0.00 0.020±0.00 N/A 0.098±0.00
ENST00000584316 N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.548±0.00
ENST00000585136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187773 ENST00000343998 0.007±0.00 0.018±0.00 N/A 2.137±1.42 0.165±0.00 0.041±0.00 0.647±0.24 N/A 0.013±0.00 N/A N/A 0.051±0.02 0.086±0.07 0.568±0.03
ENST00000400291 0.029±0.00 0.102±0.00 N/A 4.513±3.46 0.111±0.00 0.494±0.00 1.034±0.58 0.172±0.11 0.035±0.01 N/A N/A 0.029±0.00 0.146±0.09 1.671±0.66
ENSG00000215421 ENST00000299687 0.639±0.00 N/A 0.432±0.00 1.321±0.42 0.464±0.05 0.793±0.35 0.521±0.18 0.864±0.00 0.449±0.00 0.719±0.26 1.334±0.00 0.610±0.19 0.386±0.19 1.476±0.78
ENST00000309902 N/A N/A N/A 0.340±0.00 0.714±0.00 0.938±0.00 N/A N/A 1.776±0.00 N/A N/A 1.325±0.00 N/A N/A
ENST00000577538 N/A N/A N/A N/A N/A 3.242±0.00 0.600±0.00 N/A 1.326±0.00 N/A N/A 0.714±0.00 N/A N/A
ENST00000579200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582337 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.620±0.00 N/A N/A N/A N/A
ENST00000584235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264247 ENST00000577806 N/A 2.246±0.00 N/A 1.405±0.00 N/A 0.851±0.00 N/A 0.559±0.00 N/A N/A N/A 1.579±0.28 0.606±0.14 0.609±0.00
ENST00000580048 0.578±0.00 1.319±0.00 0.409±0.00 1.101±0.62 0.715±0.19 0.457±0.01 0.802±0.11 1.076±0.69 0.471±0.04 0.270±0.01 0.747±0.00 1.422±0.74 0.763±0.21 0.993±0.01
ENST00000581192 N/A N/A 1.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585279 N/A N/A N/A 1.431±0.00 N/A N/A 0.906±0.43 1.597±0.13 0.700±0.00 0.469±0.13 N/A 0.823±0.00 0.620±0.00 N/A
ENSG00000276934 ENST00000618739 0.115±0.00 0.087±0.00 2.099±0.00 0.357±0.00 0.237±0.03 0.612±0.00 0.093±0.00 0.517±0.43 N/A 0.095±0.00 N/A 0.536±0.48 0.142±0.00 0.101±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024644 ENSMUST00000025546 10.708±3.63 6.153±1.57 20.113±3.45 16.037±1.55 7.115±4.34 9.741±3.14 6.027±2.10 54.374±14.09 11.744±3.67 13.343±1.19 6.449±1.33 30.447±9.06 29.517±9.54 10.102±4.09
ENSMUST00000168419 33.288±14.93 2.082±0.58 9.241±0.51 N/A 12.952±4.31 10.079±3.97 1.187±0.18 24.969±5.79 4.671±1.54 13.820±0.46 1.717±0.68 17.807±6.84 51.526±55.27 N/A
ENSMUSG00000047992 ENSMUST00000052501 0.014±0.00 0.049±0.00 N/A 1.325±0.21 0.611±0.30 0.198±0.09 0.055±0.01 N/A 0.022±0.02 0.046±0.03 0.088±0.04 0.079±0.04 0.078±0.03 N/A
ENSMUST00000159800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.00 0.198±0.00 N/A
ENSMUST00000161033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161429 0.048±0.00 0.072±0.01 N/A N/A N/A 0.116±0.02 N/A N/A 0.009±0.00 N/A 0.264±0.06 0.134±0.06 N/A N/A
ENSMUSG00000056162 ENSMUST00000070139 0.196±0.14 N/A 0.011±0.01 0.023±0.02 0.043±0.02 0.027±0.00 N/A 4.537±0.61 0.007±0.01 N/A 0.016±0.00 0.551±0.42 0.197±0.11 0.017±0.01
ENSMUST00000130579 0.101±0.06 0.048±0.02 N/A 0.029±0.00 0.012±0.00 N/A N/A N/A 0.055±0.04 0.041±0.00 0.011±0.00 0.158±0.08 0.009±0.00 0.020±0.01
ENSMUST00000145981 1.029±0.18 N/A 0.012±0.00 0.021±0.00 0.105±0.08 0.060±0.00 N/A 4.632±0.19 0.037±0.00 N/A N/A 1.443±0.61 0.101±0.07 N/A
ENSMUSG00000065746 ENSMUST00000083812 N/A N/A N/A 2.390±0.00 N/A N/A N/A N/A N/A N/A 2.164±0.00 N/A N/A N/A
ENSMUSG00000089410 ENSMUST00000158785 N/A N/A N/A 0.129±0.00 N/A 0.409±0.00 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A
ENSMUSG00000089760 ENSMUST00000162318 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A 0.104±0.00 N/A N/A N/A
ENSMUSG00000092056 ENSMUST00000168993 N/A N/A 0.049±0.01 0.035±0.00 N/A N/A N/A 0.200±0.00 0.064±0.04 N/A N/A 0.275±0.26 0.148±0.15 0.098±0.00

Loading