C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00091O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2048 VISTA 9606 10:22392966-22994360
GeneTranscriptPositionBiotype
ENSG00000077327 (SPAG6)
sperm associated antigen 6 		ENST00000313311 (SPAG6-005) 22345497-22417610 protein_coding
ENST00000376603 (SPAG6-201) 22345445-22417596 protein_coding
ENST00000376624 (SPAG6-004) 22345470-22417621 protein_coding
ENST00000435326 (SPAG6-007) 22345498-22386792 protein_coding
ENST00000456231 (SPAG6-006) 22345487-22401255 protein_coding
ENST00000487973 (SPAG6-002) 22391805-22454224 processed_transcript
ENST00000488555 (SPAG6-008) 22345487-22401277 processed_transcript
ENST00000490361 (SPAG6-001) 22391803-22411670 processed_transcript
ENST00000538630 (SPAG6-202) 22360822-22417609 protein_coding
ENSG00000150867 (PIP4K2A)
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 		ENST00000323883 (PIP4K2A-006) 22536738-22591713 protein_coding
ENST00000376573 (PIP4K2A-001) 22534849-22714555 protein_coding
ENST00000422321 (PIP4K2A-002) 22567537-22609717 processed_transcript
ENST00000432610 (PIP4K2A-003) 22607818-22609717 processed_transcript
ENST00000474335 (PIP4K2A-004) 22536893-22539635 processed_transcript
ENST00000545335 (PIP4K2A-005) 22537015-22714108 protein_coding
ENST00000604912 (PIP4K2A-007) 22541952-22591675 protein_coding
ENST00000605011 (PIP4K2A-008) 22642022-22691830 processed_transcript
ENSG00000165309 (ARMC3)
armadillo repeat containing 3 		ENST00000298032 (ARMC3-001) 22928024-23037587 protein_coding
ENST00000376528 (ARMC3-201) 22928024-23038523 protein_coding
ENST00000409049 (ARMC3-010) 22928064-23014489 protein_coding
ENST00000409983 (ARMC3-009) 22928037-23037589 protein_coding
ENST00000447081 (ARMC3-012) 22928085-22961966 protein_coding
ENST00000464017 (ARMC3-006) 22955196-22961727 processed_transcript
ENST00000465729 (ARMC3-008) 22931996-22946683 retained_intron
ENST00000468003 (ARMC3-014) 22928085-22968342 processed_transcript
ENST00000473919 (ARMC3-005) 23030631-23031195 retained_intron
ENST00000483596 (ARMC3-013) 22928086-22962067 processed_transcript
ENST00000484642 (ARMC3-007) 22928077-22981608 processed_transcript
ENST00000491803 (ARMC3-004) 23006735-23008374 processed_transcript
ENST00000496741 (ARMC3-011) 22928077-22981453 processed_transcript
ENSG00000233451 (RP11-301N24.3)
 ENST00000422675 (RP11-301N24.3-001) 22361172-22413067 sense_overlapping
ENSG00000279819 (RP11-142L16.2)
 ENST00000624564 (RP11-142L16.2-001) 22693953-22694639 TEC
CIL_00091O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2048 VISTA 10090 2:18672805-19274286
GeneTranscriptPositionBiotype
ENSMUSG00000026736 (4930426L09Rik)
RIKEN cDNA 4930426L09 gene 		ENSMUST00000028069 (4930426L09Rik-201) 18998343-18999801 protein_coding
ENSMUSG00000026737 (Pip4k2a)
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 		ENSMUST00000006912 (Pip4k2a-001) 18842255-18998126 protein_coding
ENSMUST00000148583 (Pip4k2a-003) 18844371-18866120 protein_coding
ENSMUST00000152981 (Pip4k2a-002) 18847497-18906274 protein_coding
ENSMUSG00000026739 (Bmi1)
Bmi1 polycomb ring finger oncogene 		ENSMUST00000028071 (Bmi1-001) 18677018-18686629 protein_coding
ENSMUST00000051929 (Bmi1-201) 18680372-18686130 protein_coding
ENSMUST00000132014 (Bmi1-006) 18677280-18682365 processed_transcript
ENSMUST00000134734 (Bmi1-004) 18680994-18683030 protein_coding
ENSMUST00000147365 (Bmi1-005) 18681107-18682856 protein_coding
ENSMUST00000150834 (Bmi1-002) 18677807-18683676 protein_coding
ENSMUST00000156284 (Bmi1-003) 18680374-18684013 protein_coding
ENSMUSG00000037683 (Armc3)
armadillo repeat containing 3 		ENSMUST00000049255 (Armc3-002) 19199302-19310241 protein_coding
ENSMUST00000114640 (Armc3-001) 19199302-19310241 protein_coding
ENSMUSG00000037708 (BC061194)
cDNA sequence BC061194 		ENSMUST00000095132 (BC061194-001) 18699023-18750413 protein_coding
ENSMUST00000173763 (BC061194-003) 18699084-18732034 protein_coding
ENSMUSG00000051154 (Commd3)
COMM domain containing 3 		ENSMUST00000061158 (Commd3-001) 18672423-18676231 protein_coding
ENSMUST00000130537 (Commd3-008) 18674347-18675923 processed_transcript
ENSMUST00000131369 (Commd3-006) 18673658-18674397 processed_transcript
ENSMUST00000133685 (Commd3-003) 18673961-18675928 processed_transcript
ENSMUST00000133828 (Commd3-004) 18672435-18674635 processed_transcript
ENSMUST00000137317 (Commd3-011) 18672523-18674400 processed_transcript
ENSMUST00000137817 (Commd3-007) 18674085-18675981 processed_transcript
ENSMUST00000150590 (Commd3-009) 18674424-18675006 processed_transcript
ENSMUST00000151230 (Commd3-010) 18674649-18675501 processed_transcript
ENSMUST00000151974 (Commd3-002) 18672433-18674692 processed_transcript
ENSMUST00000154519 (Commd3-005) 18672436-18674512 processed_transcript
ENSMUST00000171845 (Commd3-201) 18672384-18676230 protein_coding
ENSMUSG00000081139 (Gm13333)
predicted gene 13333 		ENSMUST00000119424 (Gm13333-001) 18758984-18759764 processed_pseudogene
ENSMUSG00000083281 (Gm13332)
predicted gene 13332 		ENSMUST00000120451 (Gm13332-001) 19101701-19103098 processed_pseudogene
ENSMUSG00000087182 (Gm13334)
predicted gene 13334 		ENSMUST00000137796 (Gm13334-001) 18694032-18698884 protein_coding
ENSMUST00000138017 (Gm13334-002) 18694052-18699037 protein_coding
ENSMUSG00000092353 (Gm20539)
predicted gene 20539 		ENSMUST00000174811 (Gm20539-001) 18742715-18760862 processed_transcript
ENSMUSG00000097638 (Carlr)
cardiac and apoptosis-related long non-coding RNA 		ENSMUST00000181515 (Carlr-001) 18799245-18801818 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091O_0001ENSG00000077327ENST00000313311ENST00000376624ENST00000435326ENST00000456231ENST00000487973ENST00000488555ENST00000538630ENSG00000150867ENST00000323883ENST00000376573ENST00000545335ENST00000604912ENST00000605011ENSG00000165309ENST00000298032ENST00000376528ENST00000409049ENST00000409983ENST00000464017ENST00000468003ENST00000483596ENST00000491803ENST00000496741ENSG00000233451ENST00000422675ENSG00000279819ENST00000624564CIL_00091O_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077327 ENST00000313311 N/A N/A N/A N/A 0.027±0.01 N/A N/A 0.094±0.00 N/A N/A N/A 0.269±0.26 0.026±0.01 39.505±0.00
ENST00000376603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376624 N/A N/A N/A 1.190±0.00 N/A N/A N/A N/A N/A 5.727±0.00 N/A 3.279±0.00 0.015±0.00 19.075±0.00
ENST00000435326 N/A 0.278±0.00 N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A
ENST00000456231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.485±0.00
ENST00000487973 N/A 0.159±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488555 0.089±0.00 N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538630 N/A 0.021±0.00 N/A 0.837±0.13 0.021±0.00 N/A N/A N/A N/A 0.916±0.00 N/A 0.012±0.00 N/A N/A
ENSG00000150867 ENST00000323883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.790±0.00 3.459±0.00 2.123±0.00
ENST00000376573 13.281±0.00 26.112±0.00 3.279±0.00 60.629±43.83 4.071±0.89 12.604±0.00 2.728±1.67 4.580±2.76 4.412±0.89 9.543±4.91 2.285±0.00 4.764±2.02 6.728±2.19 6.811±5.23
ENST00000422321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.694±0.00 N/A 6.382±0.00
ENST00000604912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.542±0.00 11.543±0.00 6.241±0.00
ENST00000605011 2.333±0.00 3.229±0.00 0.317±0.00 0.770±0.55 1.871±0.00 1.164±0.00 0.818±0.00 1.717±0.00 0.668±0.31 1.615±0.00 0.940±0.00 0.566±0.11 0.091±0.00 0.757±0.66
ENSG00000165309 ENST00000298032 N/A N/A N/A 0.114±0.00 N/A N/A N/A N/A N/A 0.911±0.00 N/A 1.958±0.00 N/A 3.724±0.00
ENST00000376528 N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A N/A N/A
ENST00000409049 N/A N/A N/A 0.640±0.00 N/A N/A N/A N/A N/A 1.159±0.00 N/A N/A 0.022±0.00 N/A
ENST00000409983 N/A N/A N/A N/A 0.008±0.00 0.078±0.00 0.021±0.00 0.060±0.00 N/A 1.273±0.00 N/A 0.050±0.00 0.011±0.00 13.247±1.03
ENST00000447081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464017 N/A N/A N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A 0.035±0.02 0.016±0.00 N/A
ENST00000465729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.17 N/A N/A
ENST00000473919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483596 N/A N/A 0.987±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 0.078±0.00 N/A
ENST00000496741 N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000233451 ENST00000422675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A 0.071±0.04
ENSG00000279819 ENST00000624564 0.068±0.00 0.131±0.00 0.701±0.00 0.414±0.33 0.553±0.00 1.132±0.00 0.098±0.00 N/A 1.332±0.00 4.662±0.00 N/A 0.329±0.28 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026736 ENSMUST00000028069 0.288±0.10 0.301±0.14 0.492±0.09 0.142±0.06 0.533±0.23 0.350±0.02 0.087±0.02 0.266±0.11 0.148±0.09 0.249±0.02 0.059±0.02 0.481±0.15 0.203±0.12 1.272±0.73
ENSMUSG00000026737 ENSMUST00000006912 6.990±3.22 5.541±0.00 7.814±0.03 6.833±1.23 5.283±2.79 2.463±0.28 1.672±0.30 1.402±0.77 9.003±6.84 5.168±2.06 1.045±0.38 7.523±1.80 5.475±1.32 0.451±0.22
ENSMUST00000148583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152981 N/A N/A N/A 11.543±0.00 N/A N/A N/A N/A N/A N/A N/A 9.700±0.00 N/A 1.288±0.00
ENSMUSG00000026739 ENSMUST00000028071 4.958±1.14 12.417±6.21 5.651±0.53 11.648±9.25 10.194±4.95 3.825±1.60 5.048±0.80 9.141±2.16 3.129±1.00 13.476±3.00 4.993±0.55 9.711±5.67 3.363±1.50 33.319±8.11
ENSMUST00000051929 5.611±2.13 9.933±3.64 3.839±0.17 7.848±5.34 4.746±0.73 1.757±0.15 3.970±0.90 2.407±0.00 3.066±1.02 3.307±0.47 4.208±0.57 7.393±3.18 2.909±2.01 6.448±3.06
ENSMUST00000132014 N/A 18.137±4.64 N/A N/A 8.294±0.00 N/A N/A N/A 2.925±0.00 N/A N/A N/A N/A 44.983±1.51
ENSMUST00000134734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156284 N/A N/A N/A 3.806±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.271±0.00
ENSMUSG00000037683 ENSMUST00000049255 0.051±0.03 N/A 0.038±0.02 0.199±0.09 0.035±0.01 0.174±0.11 0.025±0.01 0.053±0.02 0.025±0.02 0.801±0.10 0.016±0.01 0.644±0.27 0.013±0.00 16.598±6.41
ENSMUST00000114640 N/A N/A N/A 0.107±0.04 0.007±0.00 0.003±0.00 N/A 0.006±0.00 0.059±0.05 1.009±0.00 N/A 0.110±0.00 N/A 8.774±3.21
ENSMUSG00000037708 ENSMUST00000095132 0.048±0.01 0.126±0.00 N/A 0.257±0.20 0.089±0.06 0.066±0.03 0.033±0.00 0.069±0.05 0.015±0.01 0.095±0.01 0.092±0.02 0.113±0.05 0.060±0.08 19.138±9.66
ENSMUST00000173763 N/A 0.654±0.01 N/A N/A 0.196±0.02 0.201±0.02 0.116±0.00 0.078±0.00 N/A N/A 0.247±0.05 0.404±0.14 0.079±0.00 46.070±8.74
ENSMUSG00000051154 ENSMUST00000061158 30.181±2.40 17.339±2.87 42.055±10.87 43.419±10.57 19.771±4.78 9.152±1.84 23.026±9.43 39.207±9.86 32.505±7.68 22.123±2.94 35.938±11.08 18.998±19.45 35.471±7.25 31.538±3.41
ENSMUST00000130537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.855±3.66 N/A
ENSMUST00000133828 N/A 202.835±40.54 N/A N/A 28.842±6.62 20.843±3.59 N/A 11.394±0.00 23.128±8.48 10.076±0.55 N/A 29.921±5.83 N/A N/A
ENSMUST00000137317 N/A N/A N/A 80.279±0.00 N/A N/A N/A N/A N/A N/A N/A 135.791±0.00 78.216±43.12 73.934±0.00
ENSMUST00000137817 N/A N/A N/A 12.718±0.00 N/A N/A N/A N/A N/A N/A N/A 22.963±0.00 N/A 9.344±0.00
ENSMUST00000150590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151974 N/A N/A N/A N/A N/A N/A N/A N/A 22.813±0.00 N/A N/A 10.589±0.00 N/A N/A
ENSMUST00000154519 N/A N/A N/A N/A 8.034±0.00 5.248±0.00 N/A N/A N/A 5.343±0.21 N/A 7.249±0.17 N/A N/A
ENSMUST00000171845 N/A N/A 10.527±0.00 10.009±0.00 17.259±0.00 N/A 16.073±5.60 N/A 7.065±0.00 N/A 30.415±15.72 13.963±0.00 11.227±4.18 7.249±0.00
ENSMUSG00000081139 ENSMUST00000119424 0.230±0.16 0.520±0.25 0.128±0.03 0.061±0.03 0.226±0.10 0.610±0.46 0.190±0.09 0.158±0.07 0.027±0.01 0.396±0.25 0.057±0.00 0.687±0.38 0.045±0.02 0.127±0.08
ENSMUSG00000083281 ENSMUST00000120451 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A 0.014±0.01 N/A N/A N/A N/A N/A
ENSMUSG00000087182 ENSMUST00000137796 0.185±0.03 0.131±0.00 N/A N/A 0.097±0.02 0.094±0.00 N/A 0.058±0.00 0.148±0.00 0.189±0.00 0.213±0.07 0.340±0.14 0.344±0.23 N/A
ENSMUST00000138017 0.172±0.00 0.384±0.07 N/A N/A N/A 0.237±0.09 0.101±0.00 0.077±0.02 0.080±0.06 0.249±0.07 0.295±0.18 0.279±0.09 0.167±0.00 N/A
ENSMUSG00000092353 ENSMUST00000174811 0.212±0.08 0.352±0.11 N/A 0.187±0.00 0.102±0.03 0.292±0.14 0.157±0.03 0.085±0.05 0.025±0.01 0.258±0.06 0.073±0.03 0.341±0.17 0.078±0.00 N/A
ENSMUSG00000097638 ENSMUST00000181515 0.027±0.01 N/A N/A 0.317±0.14 0.018±0.00 N/A N/A N/A 0.005±0.00 N/A N/A 0.037±0.01 N/A 6.079±2.56

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