C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocalcin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000004034 hpca-001 ENSDARG00000018397 7955 - 19:33998694-34086386 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000004034
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000004034 104.542±1.86 4.891±4.40 2.494±0.87 0.285±0.00 7.481±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030572 Hpca-201 protein_coding Mus_musculus 0 558
ENSMUST00000090150 Ncald-001 protein_coding Mus_musculus 0 364
ENSMUST00000095807 Hpca-002 protein_coding Mus_musculus 0 558
ENSMUST00000116442 Hpca-005 protein_coding Mus_musculus 0 558
ENSMUST00000116444 Hpca-001 protein_coding Mus_musculus 0 558
ENSMUST00000116445 Ncald-010 protein_coding Mus_musculus 0 364
ENSMUST00000119730 Ncald-003 protein_coding Mus_musculus 0 364
ENSMUST00000120746 Ncald-002 protein_coding Mus_musculus 0 364
ENSMUST00000125931 Hpca-006 protein_coding Mus_musculus 0 534
ENSMUST00000132423 Ncald-011 processed_transcript Mus_musculus 0 224
ENSMUST00000139450 Hpca-007 protein_coding Mus_musculus 0 558
ENSMUST00000148652 Ncald-005 protein_coding Mus_musculus 0 303
ENSMUST00000149763 Hpca-003 protein_coding Mus_musculus 0 477
ENSMUST00000153775 Ncald-007 protein_coding Mus_musculus 0 311
ENSMUST00000164649 Hpca-202 protein_coding Mus_musculus 0 558
ENSMUST00000168992 Ncald-201 protein_coding Mus_musculus 0 364
ENSMUST00000177691 Gm9285-001 unprocessed_pseudogene Mus_musculus 0 340

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