C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterile alpha and TIR motif containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000004200 sarm1-001 ENSDARG00000010610 7955 - 15:27537246-27548933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000004200
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000004200 6.154±1.58 0.095±0.09 1.378±0.63 0.083±0.00 0.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LU CIL_0003LU_0001 CGP 15:27524522-27548933
CIL_0000FM CIL_0000FM_0001 CGP 15:27537246-27557810

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061174 Sarm1-001 protein_coding Mus_musculus 9e-34 150
ENSMUST00000108287 Sarm1-002 protein_coding Mus_musculus 1e-33 150
ENSMUST00000153534 Sarm1-003 retained_intron Mus_musculus 6e-34 150
ENSMUST00000170674 Sarm1-005 retained_intron Mus_musculus 3e-26 122

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