C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003LU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026149-ENSDARG00000010610 CGP 7955 15:27524522-27548933
GeneTranscriptPositionBiotype
ENSDARG00000010610 (sarm1)
sterile alpha and TIR motif containing 1
ENSDART00000004200 (sarm1-001) 27537246-27548933 protein_coding
ENSDARG00000026149 (slc46a1)
solute carrier family 46, member 1
ENSDART00000037119 (slc46a1-001) 27524522-27535413 protein_coding
CIL_0003LU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020829-ENSMUSG00000050132 CGP 10090 11:78465697-78497754
GeneTranscriptPositionBiotype
ENSMUSG00000020829 (Slc46a1)
solute carrier family 46, member 1
ENSMUST00000001126 (Slc46a1-001) 78465697-78471945 protein_coding
ENSMUST00000146431 (Slc46a1-002) 78465750-78471622 nonsense_mediated_decay
ENSMUST00000180786 (Slc46a1-003) 78470226-78472059 retained_intron
ENSMUSG00000050132 (Sarm1)
sterile alpha and HEAT/Armadillo motif containing 1
ENSMUST00000061174 (Sarm1-001) 78473291-78497754 protein_coding
ENSMUST00000108287 (Sarm1-002) 78472330-78497458 protein_coding
ENSMUST00000130955 (Sarm1-004) 78490955-78497686 processed_transcript
ENSMUST00000153534 (Sarm1-003) 78473213-78483798 retained_intron
ENSMUST00000170674 (Sarm1-005) 78482834-78487295 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LU_0001ENSDARG00000010610ENSDART00000004200ENSDARG00000026149ENSDART00000037119CIL_0003LU_0002ENSMUSG00000020829ENSMUST00000001126ENSMUST00000146431ENSMUST00000180786ENSMUSG00000050132ENSMUST00000061174ENSMUST00000108287ENSMUST00000130955ENSMUST00000153534ENSMUST00000170674
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LU_0001ENSDARG00000010610ENSDART00000004200ENSDARG00000026149ENSDART00000037119CIL_0003LU_0002ENSMUSG00000020829ENSMUST00000001126ENSMUST00000146431ENSMUST00000180786ENSMUSG00000050132ENSMUST00000061174ENSMUST00000108287ENSMUST00000130955ENSMUST00000153534ENSMUST00000170674
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010610 ENSDART00000004200 N/A N/A N/A 6.154±1.58 N/A N/A 0.095±0.09 1.378±0.63 0.083±0.00 N/A 0.433±0.00 N/A N/A N/A
ENSDARG00000026149 ENSDART00000037119 N/A N/A N/A 1.293±0.84 N/A N/A 1.612±0.61 0.920±0.61 0.353±0.00 N/A 0.393±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020829 ENSMUST00000001126 15.933±0.99 46.427±8.85 11.745±0.75 5.121±2.60 14.149±2.20 23.119±2.13 2.583±0.35 41.216±5.33 32.267±26.58 7.166±0.71 0.260±0.05 16.655±5.99 9.376±4.83 2.909±1.39
ENSMUST00000146431 N/A N/A N/A 8.072±0.00 N/A N/A N/A N/A N/A N/A 0.311±0.10 N/A 5.674±4.93 0.150±0.00
ENSMUST00000180786 N/A N/A N/A 2.223±0.00 N/A N/A N/A N/A N/A N/A 0.065±0.03 N/A N/A N/A
ENSMUSG00000050132 ENSMUST00000061174 0.342±0.16 0.603±0.32 0.171±0.00 9.748±4.78 0.313±0.15 0.206±0.03 0.053±0.00 0.074±0.03 0.049±0.03 0.175±0.07 0.051±0.03 0.503±0.23 0.042±0.00 0.046±0.00
ENSMUST00000108287 N/A 0.261±0.11 0.122±0.05 1.352±0.00 0.110±0.00 0.086±0.05 N/A 0.045±0.01 0.045±0.03 N/A 0.032±0.01 0.127±0.07 0.073±0.00 0.147±0.00
ENSMUST00000130955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A
ENSMUST00000153534 0.135±0.04 N/A N/A N/A 0.269±0.04 N/A 0.088±0.01 0.083±0.04 0.085±0.04 N/A 0.086±0.04 0.221±0.02 0.608±0.73 0.929±0.03
ENSMUST00000170674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.231±0.00 N/A N/A N/A

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