C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early B-cell factor 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000006698 ebf1a-201 ENSDARG00000016116 7955 + 14:36182879-36409370 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000006698
Transcript ID Brain Heart Kidney Muscle
ENSDART00000006698 2.007±1.46 0.595±0.49 0.339±0.27 0.671±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043G CIL_00043G_0001 CGP 14:36129912-36409370
CIL_0005AQ CIL_0005AQ_0001 CGP 14:36182879-36545869

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022637 Ebf2-001 protein_coding Mus_musculus 0 531
ENSMUST00000176029 Ebf2-004 protein_coding Mus_musculus 0 531
ENSMUST00000176161 Ebf2-003 protein_coding Mus_musculus 0 531
ENST00000355311 EBF3-001 protein_coding Homo_sapiens 0 896
ENST00000368648 EBF3-002 protein_coding Homo_sapiens 0 749

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