C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016116-ENSDARG00000025535 CGP 7955 14:36182879-36545869
GeneTranscriptPositionBiotype
ENSDARG00000016116 (ebf1a)
early B-cell factor 1a 		ENSDART00000006698 (ebf1a-201) 36182879-36409370 protein_coding
ENSDART00000134114 (ebf1a-001) 36323322-36391249 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005AQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057098-ENSMUSG00000006169 CGP 10090 11:44617317-45910625
GeneTranscriptPositionBiotype
ENSMUSG00000006169 (Clint1)
clathrin interactor 1 		ENSMUST00000109260 (Clint1-002) 45852051-45910625 protein_coding
ENSMUST00000109261 (Clint1-001) 45852051-45910625 protein_coding
ENSMUST00000133715 (Clint1-003) 45882397-45910625 processed_transcript
ENSMUSG00000057098 (Ebf1)
early B cell factor 1 		ENSMUST00000081265 (Ebf1-001) 44617317-45008091 protein_coding
ENSMUST00000101326 (Ebf1-002) 44617317-45005529 protein_coding
ENSMUST00000109268 (Ebf1-003) 44617317-45004995 protein_coding
ENSMUST00000135993 (Ebf1-006) 44618179-44643469 processed_transcript
ENSMUST00000138452 (Ebf1-007) 44621761-44643459 processed_transcript
ENSMUST00000140822 (Ebf1-004) 44912138-44972914 processed_transcript
ENSMUST00000149997 (Ebf1-005) 44618116-44646820 processed_transcript
ENSMUSG00000076031 (Gm22751)
predicted gene, 22751 		ENSMUST00000102077 (Gm22751-201) 45829779-45829887 miRNA
ENSMUSG00000077320 (Gm22284)
predicted gene, 22284 		ENSMUST00000104132 (Gm22284-201) 45639383-45639514 snoRNA
ENSMUSG00000080981 (Gm12161)
predicted gene 12161 		ENSMUST00000121454 (Gm12161-001) 45280594-45280954 processed_pseudogene
ENSMUSG00000081251 (Gm12164)
predicted gene 12164 		ENSMUST00000121695 (Gm12164-001) 45829319-45829869 processed_pseudogene
ENSMUSG00000083017 (Gm12163)
predicted gene 12163 		ENSMUST00000121597 (Gm12163-001) 45813604-45813992 processed_pseudogene
ENSMUSG00000084773 (Gm12159)
predicted gene 12159 		ENSMUST00000143869 (Gm12159-001) 45102866-45116928 lincRNA
ENSMUSG00000085784 (Gm12158)
predicted gene 12158 		ENSMUST00000130493 (Gm12158-001) 44659522-44662676 antisense
ENSMUSG00000086686 (F630206G17Rik)
RIKEN cDNA F630206G17 gene 		ENSMUST00000137002 (F630206G17Rik-001) 45808087-45841171 processed_transcript
ENSMUSG00000087089 (Gm12160)
predicted gene 12160 		ENSMUST00000146372 (Gm12160-001) 45160943-45213656 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AQ_0001ENSDARG00000016116ENSDART00000006698ENSDART00000134114CIL_0005AQ_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AQ_0001ENSDARG00000016116ENSDART00000006698CIL_0005AQ_0002ENSMUSG00000006169ENSMUST00000109260ENSMUST00000109261ENSMUST00000133715ENSMUSG00000057098ENSMUST00000081265ENSMUST00000101326ENSMUST00000109268ENSMUST00000138452ENSMUST00000149997ENSMUSG00000076031ENSMUST00000102077ENSMUSG00000077320ENSMUST00000104132ENSMUSG00000080981ENSMUST00000121454ENSMUSG00000081251ENSMUST00000121695ENSMUSG00000083017ENSMUST00000121597ENSMUSG00000084773ENSMUST00000143869ENSMUSG00000085784ENSMUST00000130493ENSMUSG00000086686ENSMUST00000137002ENSMUSG00000087089ENSMUST00000146372
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016116 ENSDART00000006698 N/A N/A N/A 2.007±1.46 N/A N/A 0.595±0.49 0.339±0.27 N/A N/A 0.671±0.00 N/A N/A N/A
ENSDART00000134114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006169 ENSMUST00000109260 22.977±5.79 22.760±7.16 26.261±2.06 14.512±2.09 20.681±2.31 50.165±3.40 9.245±3.53 27.782±2.18 24.443±10.79 23.076±3.41 8.047±0.76 34.944±8.34 43.763±11.48 16.113±5.32
ENSMUST00000109261 8.049±3.16 8.655±2.11 10.097±0.00 8.330±0.42 8.282±0.68 16.463±2.02 7.588±1.15 8.275±3.21 7.666±2.26 9.109±1.22 2.974±0.96 14.920±2.24 11.452±1.47 9.054±1.76
ENSMUST00000133715 N/A N/A N/A 1.341±0.02 1.912±0.08 N/A N/A N/A 2.644±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000057098 ENSMUST00000081265 9.710±2.96 2.109±0.80 0.953±0.08 3.183±2.77 7.751±1.46 0.722±0.15 1.652±0.60 1.497±0.34 0.332±0.46 2.335±0.30 0.683±0.19 1.507±0.63 0.279±0.21 0.174±0.11
ENSMUST00000101326 16.550±4.91 8.106±0.82 N/A 5.137±0.45 21.239±6.47 1.390±0.56 2.470±0.77 3.046±1.17 0.242±0.24 4.999±1.54 0.386±0.00 5.193±2.25 0.141±0.08 0.459±0.09
ENSMUST00000109268 14.154±7.60 2.595±1.16 1.291±0.07 3.371±0.00 12.875±4.38 1.491±0.73 2.465±0.55 2.340±0.94 0.090±0.03 1.343±0.11 0.384±0.05 3.173±1.90 N/A 0.188±0.00
ENSMUST00000135993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138452 N/A N/A N/A 8.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149997 N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.17 N/A N/A N/A N/A N/A
ENSMUSG00000076031 ENSMUST00000102077 N/A N/A N/A N/A 2056.150±0.00 N/A N/A N/A 1384.720±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000077320 ENSMUST00000104132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.370±0.00 N/A N/A
ENSMUSG00000080981 ENSMUST00000121454 0.701±0.37 0.659±0.26 0.300±0.24 0.467±0.14 0.751±0.62 1.087±0.51 0.495±0.14 0.744±0.43 0.501±0.30 0.357±0.10 0.123±0.00 2.576±1.50 0.195±0.17 0.277±0.13
ENSMUSG00000081251 ENSMUST00000121695 0.125±0.04 0.131±0.01 0.076±0.05 0.024±0.01 0.203±0.09 0.138±0.00 N/A 0.108±0.04 0.106±0.07 N/A N/A N/A 0.137±0.07 0.123±0.04
ENSMUSG00000083017 ENSMUST00000121597 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.097±0.00 0.214±0.00 N/A N/A
ENSMUSG00000084773 ENSMUST00000143869 0.031±0.01 N/A 0.023±0.00 N/A 0.191±0.09 0.057±0.00 N/A 0.044±0.02 0.019±0.01 0.042±0.01 0.053±0.03 0.064±0.06 0.011±0.00 0.071±0.02
ENSMUSG00000085784 ENSMUST00000130493 0.556±0.05 0.414±0.15 N/A 0.624±0.52 0.687±0.27 0.237±0.00 0.277±0.05 0.216±0.07 0.054±0.00 0.322±0.07 0.074±0.00 0.316±0.37 0.118±0.07 N/A
ENSMUSG00000086686 ENSMUST00000137002 0.083±0.00 N/A 0.029±0.00 N/A 0.172±0.05 N/A 0.061±0.00 N/A N/A 0.182±0.00 0.082±0.01 0.064±0.00 0.019±0.00 N/A
ENSMUSG00000087089 ENSMUST00000146372 N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A 0.189±0.11 N/A N/A N/A N/A N/A

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