C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptosome-associated protein 25a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000007584 snap25a-001 ENSDARG00000020609 7955 + 20:34937677-34980838 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000007584
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000007584 1402.195±123.90 0.466±0.17 0.152±0.00 0.474±0.00 39.855±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZQ CIL_0001ZQ_0001 CGP 20:34893541-34980838

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000281 IMP mitotic cytokinesis
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005886 IDA plasma membrane
GO:0016020 ISS membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030054 IEA cell junction
GO:0031083 ISS BLOC-1 complex
GO:0031201 ISS SNARE complex
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028727 Snap25-001 protein_coding Mus_musculus 0 608
ENSMUST00000110098 Snap25-002 protein_coding Mus_musculus 0 531
ENST00000254976 SNAP25-003 protein_coding Homo_sapiens 0 606
ENST00000304886 SNAP25-004 protein_coding Homo_sapiens 0 529
ENST00000430336 SNAP25-002 protein_coding Homo_sapiens 0 305
ENST00000495883 SNAP25-005 processed_transcript Homo_sapiens 0 339

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