C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000007913 psmc3-201 ENSDARG00000007141 7955 + 7:40072185-40077255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000007913
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000007913 19.524±14.28 15.158±12.82 20.992±0.00 3.957±0.00 38.956±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000502 IEA proteasome complex
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0016787 IEA hydrolase activity
GO:0016887 IEA ATPase activity
GO:0017111 IEA nucleoside-triphosphatase activity
GO:0030163 IEA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002171 Psmc3-009 protein_coding Mus_musculus 0 1040
ENSMUST00000067663 Psmc3-001 protein_coding Mus_musculus 0 1123
ENSMUST00000111441 Psmc3-002 protein_coding Mus_musculus 0 939
ENSMUST00000131473 Psmc3-004 processed_transcript Mus_musculus 0 303
ENSMUST00000141462 Psmc3-003 processed_transcript Mus_musculus 0 357
ENSMUST00000146506 Psmc3-007 nonsense_mediated_decay Mus_musculus 0 623
ENSMUST00000151419 Psmc3-006 processed_transcript Mus_musculus 0 357
ENSMUST00000152269 Psmc3-005 processed_transcript Mus_musculus 0 305
ENSMUST00000185715 Psmc3-010 protein_coding Mus_musculus 0 813
ENST00000298852 PSMC3-001 protein_coding Homo_sapiens 0 1101
ENST00000524447 PSMC3-011 protein_coding Homo_sapiens 0 420
ENST00000530912 PSMC3-002 protein_coding Homo_sapiens 0 939
ENST00000602866 PSMC3-012 protein_coding Homo_sapiens 0 1101
ENST00000619920 PSMC3-201 protein_coding Homo_sapiens 0 1101

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