C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602866 PSMC3-012 ENSG00000165916 9606 - 11:47418769-47426266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000602866
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000602866 48.886±0.00 66.008±0.00 26.347±16.83 30.999±23.47 42.373±36.09 29.399±21.10 29.603±19.87 23.316±19.58 29.092±25.74 58.644±46.32 33.902±23.83 94.595±37.20 38.343±17.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0016787 IEA hydrolase activity
GO:0016887 IEA ATPase activity
GO:0030163 IEA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067663 Psmc3-001 protein_coding Mus_musculus 0 1720
ENSMUST00000002171 Psmc3-009 protein_coding Mus_musculus 0 1557
ENSMUST00000111441 Psmc3-002 protein_coding Mus_musculus 0 1332
ENSMUST00000185715 Psmc3-010 protein_coding Mus_musculus 0 1245
ENSDART00000007913 psmc3-201 protein_coding Danio_rerio 0 1101
ENSMUST00000146506 Psmc3-007 nonsense_mediated_decay Mus_musculus 0 972
ENSMUST00000141462 Psmc3-003 processed_transcript Mus_musculus 0 538
ENSMUST00000151419 Psmc3-006 processed_transcript Mus_musculus 0 532
ENSMUST00000152269 Psmc3-005 processed_transcript Mus_musculus 0 527
ENSMUST00000131473 Psmc3-004 processed_transcript Mus_musculus 0 431
ENSMUST00000145317 Psmc3-008 processed_transcript Mus_musculus 1e-38 165

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