C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000008535 u2af2a-001 ENSDARG00000012505 7955 + 16:14563893-14573189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000008535
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000008535 12.586±0.57 6.275±1.45 11.935±5.36 1.095±0.00 1.915±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0046660 IEA female sex differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005041 U2af2-201 protein_coding Mus_musculus 0 821
ENSMUST00000165399 U2af2-202 protein_coding Mus_musculus 0 660
ENST00000308924 U2AF2-002 protein_coding Homo_sapiens 0 776
ENST00000450554 U2AF2-001 protein_coding Homo_sapiens 0 815
ENST00000587275 U2AF2-009 retained_intron Homo_sapiens 0 196
ENST00000590551 U2AF2-008 protein_coding Homo_sapiens 0 614
ENST00000592874 U2AF2-007 nonsense_mediated_decay Homo_sapiens 0 337

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