C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high density lipoprotein-binding protein a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000011863 hdlbpa-001 ENSDARG00000009830 7955 - 6:26583067-26603978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000011863
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000011863 32.328±2.87 86.974±70.71 125.788±102.94 170.257±0.00 73.685±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0071391 IDA cellular response to estrogen stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042498 Hdlbp-003 protein_coding Mus_musculus 0 1629
ENSMUST00000170883 Hdlbp-001 protein_coding Mus_musculus 0 1629
ENSMUST00000186164 Hdlbp-004 protein_coding Mus_musculus 0 1074
ENST00000310931 HDLBP-003 protein_coding Homo_sapiens 0 1626
ENST00000373292 HDLBP-004 protein_coding Homo_sapiens 0 968
ENST00000391975 HDLBP-001 protein_coding Homo_sapiens 0 1626
ENST00000391976 HDLBP-002 protein_coding Homo_sapiens 0 1626
ENST00000427183 HDLBP-201 protein_coding Homo_sapiens 0 1068
ENST00000479894 HDLBP-050 retained_intron Homo_sapiens 9e-33 145
ENST00000483086 HDLBP-049 processed_transcript Homo_sapiens 8e-32 141
ENST00000487169 HDLBP-005 retained_intron Homo_sapiens 0 678

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