C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000011946 GABRR1 (1 of 2)-201 ENSDARG00000013047 7955 - 17:53799537-53813413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000011946
Transcript ID Brain Heart Kidney
ENSDART00000011946 1.186±0.57 2.238±0.65 1.000±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024035 Gabrr2-201 protein_coding Mus_musculus 0 817
ENSMUST00000108162 Gabrr2-001 protein_coding Mus_musculus 0 817
ENSMUST00000131920 Gabrr2-003 protein_coding Mus_musculus 0 527
ENSMUST00000147889 Gabrr2-002 protein_coding Mus_musculus 0 518
ENST00000369451 GABRR1-003 protein_coding Homo_sapiens 0 850
ENST00000402938 GABRR2-001 protein_coding Homo_sapiens 0 745
ENST00000435811 GABRR1-201 protein_coding Homo_sapiens 0 854
ENST00000454853 GABRR1-001 protein_coding Homo_sapiens 0 850
ENST00000457434 GABRR1-002 nonsense_mediated_decay Homo_sapiens 0 850
ENST00000602432 GABRR2-002 retained_intron Homo_sapiens 0 643
ENST00000611484 GABRR1-202 protein_coding Homo_sapiens 0 850
ENST00000621627 GABRR1-203 protein_coding Homo_sapiens 0 850

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