C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000014257 atp2b1a-201 ENSDARG00000012684 7955 - 4:15143939-15189809 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENSDART00000014257
Transcript ID Heart Kidney Liver
ENSDART00000014257 1.262±0.42 2.413±0.00 0.368±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033744 Atp2b3-003 protein_coding Mus_musculus 0 1234
ENSMUST00000088429 Atp2b3-001 protein_coding Mus_musculus 0 1290
ENSMUST00000114479 Atp2b3-002 protein_coding Mus_musculus 0 1238
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 1175
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 1175
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 1179
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 1179
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 1369
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1074

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