C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000383800 ATP2B2-002 ENSG00000157087 9606 - 3:10324023-10505657 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleTestisENST00000383800
Transcript ID Brain Muscle Testis
ENST00000383800 13.845±0.54 0.618±0.25 0.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064R CIL_00064R_0001 CGP 3:10293131-10708031
CIL_0001NW CIL_0001NW_0001 CGP 3:10324023-10940733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 NAS:IEA calcium-transporting ATPase activity
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006810 NAS transport
GO:0006816 IMP calcium ion transport
GO:0007596 TAS blood coagulation
GO:0007605 IMP sensory perception of sound
GO:0008022 IPI protein C-terminus binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030165 IDA PDZ domain binding
GO:0030182 IDA neuron differentiation
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0051480 IMP cytosolic calcium ion homeostasis
GO:0055085 TAS transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089003 Atp2b2-004 protein_coding Mus_musculus 0 5406
ENSMUST00000101045 Atp2b2-001 protein_coding Mus_musculus 0 5291
ENSMUST00000152831 Atp2b2-002 nonsense_mediated_decay Mus_musculus 0 4711
ENSMUST00000101044 Atp2b2-003 protein_coding Mus_musculus 0 3818
ENSDART00000092726 atp2b2-201 protein_coding Danio_rerio 0 2006
ENSMUST00000088429 Atp2b3-001 protein_coding Mus_musculus 0 1792
ENSMUST00000114479 Atp2b3-002 protein_coding Mus_musculus 0 1722
ENSMUST00000033744 Atp2b3-003 protein_coding Mus_musculus 0 1718
ENSMUST00000135199 Atp2b2-005 retained_intron Mus_musculus 0 1568
ENSDART00000092725 atp2b3b-201 protein_coding Danio_rerio 0 1423
ENSDART00000153828 atp2b3b-001 protein_coding Danio_rerio 0 1423
ENSDART00000014257 atp2b1a-201 protein_coding Danio_rerio 0 1179
ENSDART00000128079 atp2b1a-202 protein_coding Danio_rerio 0 1175
ENSDART00000077664 atp2b1a-001 protein_coding Danio_rerio 0 1175
ENSMUST00000165602 Atp2b4-202 protein_coding Mus_musculus 0 1164
ENSMUST00000143567 Atp2b4-001 protein_coding Mus_musculus 0 1164
ENSMUST00000048953 Atp2b4-201 protein_coding Mus_musculus 0 1158
ENSMUST00000125659 Atp2b4-003 protein_coding Mus_musculus 0 1158
ENSMUST00000112264 Atp2b4-002 protein_coding Mus_musculus 0 1155
ENSMUST00000144507 Atp2b2-006 processed_transcript Mus_musculus 0 222
ENSMUST00000154738 Atp2b2-007 processed_transcript Mus_musculus 9e-22 111

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