C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452124 ATP2B2-003 ENSG00000157087 9606 - 3:10328098-10410675 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartMuscleOvaryPlacentaTestisENST00000452124
Transcript ID Brain Breast Heart Muscle Ovary Placenta Testis
ENST00000452124 6.105±0.00 0.077±0.04 0.013±0.00 0.899±0.00 0.109±0.00 0.017±0.00 0.160±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064R CIL_00064R_0001 CGP 3:10293131-10708031
CIL_0001NW CIL_0001NW_0001 CGP 3:10324023-10940733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101044 Atp2b2-003 protein_coding Mus_musculus 0 3862
ENSMUST00000101045 Atp2b2-001 protein_coding Mus_musculus 0 3818
ENSMUST00000089003 Atp2b2-004 protein_coding Mus_musculus 0 3818
ENSMUST00000152831 Atp2b2-002 nonsense_mediated_decay Mus_musculus 0 3240
ENSMUST00000088429 Atp2b3-001 protein_coding Mus_musculus 0 2174
ENSMUST00000114479 Atp2b3-002 protein_coding Mus_musculus 0 2104
ENSMUST00000033744 Atp2b3-003 protein_coding Mus_musculus 0 2100
ENSDART00000092726 atp2b2-201 protein_coding Danio_rerio 0 2036
ENSDART00000092725 atp2b3b-201 protein_coding Danio_rerio 0 1794
ENSDART00000153828 atp2b3b-001 protein_coding Danio_rerio 0 1794
ENSMUST00000165602 Atp2b4-202 protein_coding Mus_musculus 0 1424
ENSMUST00000143567 Atp2b4-001 protein_coding Mus_musculus 0 1424
ENSMUST00000048953 Atp2b4-201 protein_coding Mus_musculus 0 1419
ENSMUST00000125659 Atp2b4-003 protein_coding Mus_musculus 0 1419
ENSMUST00000112264 Atp2b4-002 protein_coding Mus_musculus 0 1415
ENSDART00000014257 atp2b1a-201 protein_coding Danio_rerio 0 1369
ENSDART00000128079 atp2b1a-202 protein_coding Danio_rerio 0 1192
ENSDART00000077664 atp2b1a-001 protein_coding Danio_rerio 0 1192
ENSMUST00000135199 Atp2b2-005 retained_intron Mus_musculus 0 758

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