C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetraspanin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000016002 tspan7-001 ENSDARG00000015759 7955 - 14:43002971-43011885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000016002
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000016002 8.938±1.06 30.999±1.52 13.168±0.21 0.908±0.00 8.544±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076354 Tspan7-001 protein_coding Mus_musculus 1e-38 165
ENSMUST00000115526 Tspan7-002 protein_coding Mus_musculus 6e-38 165
ENSMUST00000149982 Tspan7-003 retained_intron Mus_musculus 5e-38 165
ENST00000286824 TSPAN7-005 protein_coding Homo_sapiens 8e-25 119
ENST00000378482 TSPAN7-001 protein_coding Homo_sapiens 7e-32 143
ENST00000419600 TSPAN7-006 retained_intron Homo_sapiens 1e-24 119
ENST00000465127 TM4SF2-001 protein_coding Homo_sapiens 6e-25 119
ENST00000471410 TSPAN7-003 nonsense_mediated_decay Homo_sapiens 8e-25 119
ENST00000475216 TSPAN7-004 nonsense_mediated_decay Homo_sapiens 8e-25 119
ENST00000480976 TSPAN7-008 nonsense_mediated_decay Homo_sapiens 3e-25 119
ENST00000488893 TSPAN7-002 processed_transcript Homo_sapiens 5e-25 119
ENST00000494037 TSPAN7-009 processed_transcript Homo_sapiens 2e-23 113

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