C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 2 (ARID, RFX-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000019144 arid2-001 ENSDARG00000007413 7955 - 4:1506153-1543390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000019144
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000019144 2.979±3.06 2.865±0.81 4.520±1.92 0.391±0.00 1.984±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005488 IEA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096250 Arid2-001 protein_coding Mus_musculus 2e-28 134
ENSMUST00000176739 Arid2-003 retained_intron Mus_musculus 8e-29 134
ENST00000334344 ARID2-001 protein_coding Homo_sapiens 2e-28 134
ENST00000444670 ARID2-003 protein_coding Homo_sapiens 2e-28 134
ENST00000457135 ARID2-006 protein_coding Homo_sapiens 1e-28 134
ENST00000479608 ARID2-004 processed_transcript Homo_sapiens 2e-28 134

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