C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 2 (ARID, RFX-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457135 ARID2-006 ENSG00000189079 9606 + 12:45852295-45908040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000457135
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000457135 0.933±0.00 0.973±0.00 0.781±0.00 1.021±0.00 0.394±0.00 0.943±0.00 0.932±0.45 0.539±0.00 3.105±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R9 CIL_0006R9_0001 CGP 12:45729665-45992120

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096250 Arid2-001 protein_coding Mus_musculus 0 2206
ENSMUST00000176739 Arid2-003 retained_intron Mus_musculus 0 2141
ENSDART00000019144 arid2-001 protein_coding Danio_rerio 1e-28 134

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