C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 2 (ARID, RFX-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444670 ARID2-003 ENSG00000189079 9606 + 12:45837395-45908040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444670
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444670 0.569±0.00 0.393±0.00 0.312±0.02 0.700±0.35 0.651±0.00 0.321±0.00 0.890±0.46 0.237±0.00 1.172±0.52 0.768±0.49 4.092±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R9 CIL_0006R9_0001 CGP 12:45729665-45992120

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096250 Arid2-001 protein_coding Mus_musculus 0 6748
ENSMUST00000176739 Arid2-003 retained_intron Mus_musculus 0 2386
ENSDART00000019144 arid2-001 protein_coding Danio_rerio 2e-28 134

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