C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000019149 rpl7-001 ENSDARG00000007320 7955 - 2:29892308-29897185 protein_coding

Danio rerio EnsemblZv9

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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000019149
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000019149 187.979±135.93 1171.520±159.63 748.000±726.01 730.184±0.00 662.815±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C3 CIL_0005C3_0001 CGP 2:29892308-29901139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005840 IEA ribosome
GO:0030529 IEA ribonucleoprotein complex
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333817 RPL7P26-001 processed_pseudogene Homo_sapiens 0 303
ENST00000403775 RPL7P27-001 processed_pseudogene Homo_sapiens 0 272
ENST00000411964 RPL7P8-003 processed_pseudogene Homo_sapiens 0 259
ENST00000446719 RPL7P12-001 processed_pseudogene Homo_sapiens 0 305
ENST00000478965 RPL7P18-001 processed_pseudogene Homo_sapiens 4.2039e-45 185
ENST00000520308 RPL7P20-001 processed_pseudogene Homo_sapiens 0 255

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