C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446719 RPL7P12-001 ENSG00000227770 9606 + 2:38231568-38232317 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLungMuscleOvaryENST00000446719
Transcript ID Adipose Adrenal Brain Breast Lung Muscle Ovary
ENST00000446719 0.174±0.00 0.148±0.00 0.097±0.00 0.128±0.00 0.092±0.00 0.014±0.00 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IO CIL_0002IO_0001 CGP 2:38066973-38377285

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 717
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 695
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 660
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 466
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 459
ENSDART00000019149 rpl7-001 protein_coding Danio_rerio 0 305
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 243
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 243

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