C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: talin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000023584 TLN2 (2 of 2)-201 ENSDARG00000044271 7955 - 25:33983333-34104360 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000023584
Transcript ID Brain Heart Kidney Liver
ENSDART00000023584 4.216±1.68 0.494±0.09 0.491±0.08 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H2 CIL_0005H2_0001 CGP 25:33891094-34104360

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0005198 IEA structural molecule activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005925 IEA focal adhesion
GO:0007016 IEA cytoskeletal anchoring at plasma membrane
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039662 Tln2-201 protein_coding Mus_musculus 0 3367
ENSMUST00000040025 Tln2-202 protein_coding Mus_musculus 0 3367
ENST00000306829 TLN2-201 protein_coding Homo_sapiens 0 3290
ENST00000561311 TLN2-001 protein_coding Homo_sapiens 0 3290

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