C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: talin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561311 TLN2-001 ENSG00000171914 9606 + 15:62561365-62844631 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartLiverLungOvaryPlacentaENST00000561311
Transcript ID Adipose Adrenal Breast Heart Liver Lung Ovary Placenta
ENST00000561311 1.516±0.00 0.324±0.00 2.717±1.42 1.482±0.18 1.181±0.00 0.439±0.00 0.647±0.22 0.257±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000502 CIL_000502_0002 CGP 15:62390526-63071915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 NAS:IEA actin binding
GO:0005158 IEA insulin receptor binding
GO:0005198 NAS structural molecule activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005911 IC cell-cell junction
GO:0005916 IEA fascia adherens
GO:0005925 IDA:IEA focal adhesion
GO:0007016 IEA cytoskeletal anchoring at plasma membrane
GO:0007043 TAS cell-cell junction assembly
GO:0007155 NAS:IEA cell adhesion
GO:0015629 NAS actin cytoskeleton
GO:0045202 NAS synapse
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040025 Tln2-202 protein_coding Mus_musculus 0 9893
ENSMUST00000039662 Tln2-201 protein_coding Mus_musculus 0 9762
ENSDART00000023584 TLN2 (2 of 2)-201 protein_coding Danio_rerio 0 3290
ENSDART00000078135 tln1-001 protein_coding Danio_rerio 0 2338
ENSDART00000013609 tln1-201 protein_coding Danio_rerio 0 2311
ENSMUST00000030187 Tln1-001 protein_coding Mus_musculus 0 1184
ENSDART00000156901 TLN2 (2 of 2)-001 protein_coding Danio_rerio 0 1151

Loading