C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: talin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306829 TLN2-201 ENSG00000171914 9606 + 15:62647311-62844631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000306829
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000306829 3.202±0.00 0.283±0.00 4.911±0.83 4.556±0.00 1.627±0.68 3.211±0.00 0.387±0.00 0.425±0.00 1.544±0.61 0.570±0.10 0.267±0.00 1.464±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000502 CIL_000502_0002 CGP 15:62390526-63071915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 NAS:IEA actin binding
GO:0005158 IEA insulin receptor binding
GO:0005198 NAS structural molecule activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005911 IC cell-cell junction
GO:0005925 IDA:IEA focal adhesion
GO:0007016 IEA cytoskeletal anchoring at plasma membrane
GO:0007043 TAS cell-cell junction assembly
GO:0007155 NAS:IEA cell adhesion
GO:0015629 NAS actin cytoskeleton
GO:0045202 NAS synapse
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040025 Tln2-202 protein_coding Mus_musculus 0 9865
ENSMUST00000039662 Tln2-201 protein_coding Mus_musculus 0 9734
ENSDART00000023584 TLN2 (2 of 2)-201 protein_coding Danio_rerio 0 3290
ENSDART00000078135 tln1-001 protein_coding Danio_rerio 0 2338
ENSDART00000013609 tln1-201 protein_coding Danio_rerio 0 2311
ENSMUST00000030187 Tln1-001 protein_coding Mus_musculus 0 1184
ENSDART00000156901 TLN2 (2 of 2)-001 protein_coding Danio_rerio 0 1151

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