C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase type IVA, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000026814 ptp4a1-001 ENSDARG00000006242 7955 + 11:11389226-11396293 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000026814
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000026814 99.473±2.43 18.968±6.00 11.080±5.95 3.573±0.00 12.212±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000620 CIL_000620_0001 CGP 11:11384827-11396293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005575 ND cellular_component
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027232 Ptp4a1-001 protein_coding Mus_musculus 8.96831e-44 183
ENSMUST00000076587 Ptp4a1-005 protein_coding Mus_musculus 2e-38 165
ENSMUST00000124445 Ptp4a1-002 processed_transcript Mus_musculus 1e-30 137
ENST00000370651 PTP4A1-004 protein_coding Homo_sapiens 9.94922e-44 183
ENST00000470661 PTP4A1-002 processed_transcript Homo_sapiens 4e-29 132
ENST00000473334 PTP4A1-003 processed_transcript Homo_sapiens 5e-29 132
ENST00000578299 PTP4A1-005 protein_coding Homo_sapiens 9.94922e-44 178

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