C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB5A, member RAS oncogene family, a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000034124 rab5aa-001 ENSDARG00000018602 7955 + 19:21190757-21204665 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000034124
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000034124 43.603±11.25 26.865±10.02 18.060±1.84 2.815±0.00 28.005±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346213 RAB5C-001 protein_coding Homo_sapiens 0 479
ENST00000393860 RAB5C-201 protein_coding Homo_sapiens 0 479
ENST00000546881 RAB5C-007 retained_intron Homo_sapiens 0 279
ENST00000547517 RAB5C-002 protein_coding Homo_sapiens 0 479
ENST00000550504 RAB5C-004 protein_coding Homo_sapiens 0 246
ENST00000551338 RAB5C-006 protein_coding Homo_sapiens 0 320
ENST00000552162 RAB5C-005 protein_coding Homo_sapiens 0 315
ENST00000592248 CTD-2132N18.3-002 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000592574 CTD-2132N18.3-001 protein_coding Homo_sapiens 0 372

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