C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RAB5C, member RAS oncogene family | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000551338  |
RAB5C-006 |
ENSG00000108774 |
9606 | - |
17:42126523-42128759  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002IY | CIL_0002IY_0001 | CGP | 17:42121431-42155044 |
| CIL_0002J1 | CIL_0002J1_0001 | CGP | 17:42124976-42181278 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005525 | IEA | GTP binding |
| GO:0005622 | IEA | intracellular |
| GO:0006184 | IEA | GTP catabolic process |
| GO:0007165 | IEA | signal transduction |
| GO:0007264 | IEA | small GTPase mediated signal transduction |
| GO:0015031 | IEA | protein transport |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107364
|
Rab5c-001 | protein_coding | Mus_musculus | 0 | 473 |
|
ENSMUST00000019317
|
Rab5c-002 | protein_coding | Mus_musculus | 0 | 344 |
|
ENSDART00000129730
|
rab5aa-201 | protein_coding | Danio_rerio | 0 | 320 |
|
ENSDART00000034124
|
rab5aa-001 | protein_coding | Danio_rerio | 0 | 320 |
|
ENSDART00000142127
|
rab5aa-002 | retained_intron | Danio_rerio | 0 | 198 |
|
ENSMUST00000155843
|
Rab5c-004 | protein_coding | Mus_musculus | 0.00000006 | 62 |
