C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spleen focus forming virus (SFFV) proviral integration oncogene spi1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000036729 spi1b-201 ENSDARG00000000767 7955 - 7:33979183-33993538 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000036729
Transcript ID Brain Heart Kidney Muscle
ENSDART00000036729 0.834±0.18 5.173±0.00 23.807±0.00 1.638±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LM CIL_0002LM_0001 CGP 7:33979183-34050526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0010628 IMP positive regulation of gene expression
GO:0030099 IMP myeloid cell differentiation
GO:0030223 IMP neutrophil differentiation
GO:0030225 IMP macrophage differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045647 IMP negative regulation of erythrocyte differentiation
GO:0048821 IMP erythrocyte development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002180 Spi1-001 protein_coding Mus_musculus 0 257
ENST00000227163 SPI1-004 protein_coding Homo_sapiens 0 246
ENST00000378538 SPI1-001 protein_coding Homo_sapiens 0 246
ENST00000533030 SPI1-003 protein_coding Homo_sapiens 0 244

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