C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB1A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000043002 rab1a-001 ENSDARG00000029663 7955 + 13:24626296-24635851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000043002
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000043002 39.154±10.19 24.971±8.80 28.365±4.28 3.730±0.00 11.845±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ON CIL_0004ON_0001 CGP 13:24626296-24652985

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020358 Rab1-001 protein_coding Mus_musculus 0 538
ENSMUST00000109602 Rab1-003 protein_coding Mus_musculus 0 276
ENSMUST00000163483 Rab1-201 protein_coding Mus_musculus 0 538

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