C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004ON_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029663-ENSDARG00000039411 CGP 7955 13:24626296-24652985
GeneTranscriptPositionBiotype
ENSDARG00000029663 (rab1a)
RAB1A, member RAS oncogene family 		ENSDART00000043002 (rab1a-001) 24626296-24635851 protein_coding
ENSDARG00000039411 (cep68)
centrosomal protein 68 		ENSDART00000057588 (cep68-001) 24645405-24652985 protein_coding
ENSDART00000125949 (cep68-201) 24639272-24649722 protein_coding
ENSDART00000147514 (cep68-002) 24648971-24652956 protein_coding
CIL_0004ON_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020149-ENSMUSG00000044066 CGP 10090 11:20201432-20249429
GeneTranscriptPositionBiotype
ENSMUSG00000020149 (Rab1)
RAB1, member RAS oncogene family 		ENSMUST00000020358 (Rab1-001) 20201432-20226856 protein_coding
ENSMUST00000109601 (Rab1-002) 20201439-20225464 protein_coding
ENSMUST00000109602 (Rab1-003) 20201435-20226850 protein_coding
ENSMUST00000132285 (Rab1-004) 20201439-20219487 processed_transcript
ENSMUST00000152728 (Rab1-005) 20201609-20223572 processed_transcript
ENSMUST00000163483 (Rab1-201) 20201602-20226856 protein_coding
ENSMUSG00000044066 (Cep68)
centrosomal protein 68 		ENSMUST00000050611 (Cep68-001) 20227037-20249418 protein_coding
ENSMUST00000109596 (Cep68-002) 20238386-20249418 protein_coding
ENSMUST00000161218 (Cep68-004) 20241523-20249383 retained_intron
ENSMUST00000162811 (Cep68-003) 20238387-20249429 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ON_0001ENSDARG00000029663ENSDART00000043002ENSDARG00000039411ENSDART00000057588ENSDART00000125949ENSDART00000147514CIL_0004ON_0002ENSMUSG00000020149ENSMUST00000020358ENSMUST00000109601ENSMUST00000109602ENSMUST00000132285ENSMUST00000152728ENSMUST00000163483ENSMUSG00000044066ENSMUST00000050611ENSMUST00000109596ENSMUST00000161218ENSMUST00000162811
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ON_0001ENSDARG00000029663ENSDART00000043002ENSDARG00000039411ENSDART00000057588ENSDART00000125949CIL_0004ON_0002ENSMUSG00000020149ENSMUST00000020358ENSMUST00000109601ENSMUST00000109602ENSMUST00000132285ENSMUST00000152728ENSMUST00000163483ENSMUSG00000044066ENSMUST00000050611ENSMUST00000109596ENSMUST00000161218ENSMUST00000162811
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029663 ENSDART00000043002 N/A N/A N/A 39.154±10.19 N/A N/A 24.971±8.80 28.365±4.28 3.730±0.00 N/A 11.845±0.00 N/A N/A N/A
ENSDARG00000039411 ENSDART00000057588 N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A
ENSDART00000125949 N/A N/A N/A 0.723±0.00 N/A N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020149 ENSMUST00000020358 38.470±9.35 27.930±14.66 64.056±3.47 52.159±3.26 20.353±7.54 45.808±11.62 25.925±7.87 65.411±11.54 34.153±10.24 55.944±7.61 24.883±3.29 30.802±10.71 47.658±35.51 7.088±0.64
ENSMUST00000109601 N/A N/A 44.777±1.77 52.970±6.92 N/A N/A N/A N/A 33.420±12.73 N/A N/A 38.163±17.89 87.941±31.54 7.188±1.64
ENSMUST00000109602 N/A 18.734±5.29 N/A N/A 15.866±4.14 20.031±9.80 N/A 19.498±6.58 14.751±0.00 8.358±0.00 N/A 16.413±5.95 N/A N/A
ENSMUST00000132285 N/A 60.560±3.94 N/A N/A N/A 31.913±0.00 N/A N/A N/A N/A N/A 43.307±18.27 N/A N/A
ENSMUST00000152728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.489±0.00
ENSMUST00000163483 N/A N/A N/A 41.951±0.00 30.469±14.34 N/A 14.239±0.00 N/A 20.408±0.00 N/A 5.888±1.24 41.834±4.17 63.399±28.53 5.065±0.00
ENSMUSG00000044066 ENSMUST00000050611 4.385±1.33 2.550±1.37 5.463±0.24 5.387±2.28 3.983±0.64 1.712±0.20 5.480±0.97 3.210±0.32 2.185±0.95 5.359±0.61 5.789±0.75 5.062±1.67 2.884±1.19 1.359±0.43
ENSMUST00000109596 4.124±0.15 5.895±1.03 N/A N/A 4.689±1.59 3.011±1.44 3.180±0.47 3.281±0.81 1.940±0.56 4.267±0.72 2.365±0.00 9.653±1.48 2.803±0.35 1.355±0.19
ENSMUST00000161218 N/A N/A N/A 4.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162811 1.325±0.00 1.288±0.30 N/A 1.600±0.25 1.276±0.13 0.622±0.01 N/A N/A 0.862±0.15 1.468±0.18 N/A 1.924±0.04 0.866±0.12 0.611±0.08

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