C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000045583 MTA1-002 ENSDARG00000007198 7955 + 17:37678352-37786409 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000045583
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000045583 4.948±3.65 1.909±1.81 0.637±0.00 0.481±0.00 2.960±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331320 MTA1-001 protein_coding Homo_sapiens 8.00141e-43 180
ENST00000405094 MTA3-017 protein_coding Homo_sapiens 0 409
ENST00000405646 MTA1-003 protein_coding Homo_sapiens 0 972
ENST00000406191 MTA1-002 protein_coding Homo_sapiens 8.00141e-43 180
ENST00000406911 MTA3-003 protein_coding Homo_sapiens 0 401
ENST00000407270 MTA3-002 protein_coding Homo_sapiens 0 411
ENST00000409019 MTA3-018 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000424723 MTA1-006 nonsense_mediated_decay Homo_sapiens 7e-24 115
ENST00000430763 MTA3-010 nonsense_mediated_decay Homo_sapiens 8e-23 111
ENST00000435036 MTA1-201 protein_coding Homo_sapiens 8.00141e-43 180
ENST00000438610 MTA1-004 nonsense_mediated_decay Homo_sapiens 5.99756e-43 180
ENST00000454356 MTA3-004 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000481012 MTA1-009 retained_intron Homo_sapiens 0 222
ENST00000548638 TEX22-001 nonsense_mediated_decay Homo_sapiens 2e-31 139

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