C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1 family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454356 MTA3-004 ENSG00000057935 9606 + 2:42568675-42709213 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000454356
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000454356 3.294±0.00 1.710±0.00 2.272±0.00 2.158±0.00 2.796±0.00 3.408±1.68 1.491±0.00 2.584±0.00 27.204±22.65 10.031±9.91 26.326±15.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TA CIL_0003TA_0002 CGP 2:42442017-42756947
CIL_0003T7 CIL_0003T7_0002 CGP 2:42494569-42764261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112350 Mta3-002 protein_coding Mus_musculus 0 1783
ENSMUST00000112349 Mta3-005 protein_coding Mus_musculus 0 1773
ENSMUST00000112352 Mta3-004 protein_coding Mus_musculus 0 1700
ENSMUST00000067826 Mta3-001 protein_coding Mus_musculus 0 1681
ENSMUST00000177069 Mta3-003 nonsense_mediated_decay Mus_musculus 0 1480
ENSMUST00000176816 Mta3-007 protein_coding Mus_musculus 0 691
ENSMUST00000176054 Mta3-008 protein_coding Mus_musculus 0 512
ENSDART00000122665 mta3-004 protein_coding Danio_rerio 0 457
ENSDART00000127454 mta3-001 protein_coding Danio_rerio 0 457
ENSDART00000077180 mta3-002 protein_coding Danio_rerio 0 457
ENSDART00000157183 MTA1-001 retained_intron Danio_rerio 8e-23 111
ENSDART00000045583 MTA1-002 protein_coding Danio_rerio 0 401
ENSDART00000156281 MTA1-003 retained_intron Danio_rerio 2e-28 130

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