C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glutamate receptor, ionotropic, AMPA 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000049291 gria3a-001 ENSDARG00000032737 7955 - 5:25025744-25098163 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000049291
Transcript ID Brain Heart Kidney Liver
ENSDART00000049291 18.215±9.49 0.018±0.00 0.143±0.00 0.018±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005215 IEA transporter activity
GO:0005216 IEA ion channel activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027020 Gria4-201 protein_coding Mus_musculus 0 797
ENSMUST00000063508 Gria4-202 protein_coding Mus_musculus 0 885
ENSMUST00000076349 Gria3-001 protein_coding Mus_musculus 0 1363
ENSMUST00000139965 Gria3-002 nonsense_mediated_decay Mus_musculus 0 283
ENST00000620443 GRIA3-001 protein_coding Homo_sapiens 0 1469
ENST00000620581 GRIA3-201 protein_coding Homo_sapiens 0 300

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