C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY-box containing gene 19b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000058910 sox19b-001 ENSDARG00000040266 7955 - 7:27620451-27623815 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000058910
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000058910 3.400±1.45 0.045±0.00 7.360±0.69 0.100±0.00 0.029±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099151 Sox2-001 protein_coding Mus_musculus 0 248
ENSMUST00000135107 Sox3-001 protein_coding Mus_musculus 0 248
ENSMUST00000180353 Sox1-001 protein_coding Mus_musculus 0 204
ENST00000330949 SOX1-001 protein_coding Homo_sapiens 0 215
ENST00000376945 SOX21-001 protein_coding Homo_sapiens 0 248

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