Transcript ID | Adrenal | Brain | Colon | Heart | Liver | Lung | Ovary | Placenta | Testis |
---|---|---|---|---|---|---|---|---|---|
ENSMUST00000180353 | 0.012±0.01 | 8.552±5.00 | 0.055±0.01 | 0.006±0.00 | 0.029±0.04 | 0.005±0.00 | 0.013±0.00 | 0.004±0.00 | 0.717±0.41 |
Transcript Info |
||||||
Description: | SRY (sex determining region Y)-box 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000180353 | Sox1-001 | ENSMUSG00000096014 | 10090 | + | 8:12395295-12400126 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0008SC | CIL_0008SC_0002 | VISTA | 8:12162372-12763356 |
CIL_0007MI | CIL_0007MI_0002 | UCNEbase | 8:12327809-12463108 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001046 | IEA | core promoter sequence-specific DNA binding |
GO:0001764 | IMP | neuron migration |
GO:0002089 | IMP | lens morphogenesis in camera-type eye |
GO:0003677 | IDA | DNA binding |
GO:0005515 | IEA | protein binding |
GO:0005634 | IDA | nucleus |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0006355 | IEA | regulation of transcription, DNA-templated |
GO:0021521 | IMP | ventral spinal cord interneuron specification |
GO:0021879 | IMP | forebrain neuron differentiation |
GO:0021884 | IMP | forebrain neuron development |
GO:0030900 | IMP | forebrain development |
GO:0043565 | IDA | sequence-specific DNA binding |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000104493 | sox2-001 | protein_coding | Danio_rerio | 0 | 259 |
ENSDART00000075617 | sox3-001 | protein_coding | Danio_rerio | 0 | 246 |
ENSDART00000058910 | sox19b-001 | protein_coding | Danio_rerio | 0 | 204 |
ENSDART00000049339 | sox21a-001 | protein_coding | Danio_rerio | 9.94922e-44 | 183 |
ENST00000245479 | SOX9-001 | protein_coding | Homo_sapiens | 7e-20 | 104 |
ENST00000306087 | SOX14-001 | protein_coding | Homo_sapiens | 0 | 302 |
ENST00000325404 | SOX2-001 | protein_coding | Homo_sapiens | 0 | 359 |
ENST00000330949 | SOX1-001 | protein_coding | Homo_sapiens | 0 | 2119 |
ENST00000340356 | SOX18-001 | protein_coding | Homo_sapiens | 7e-17 | 94 |
ENST00000360880 | SOX10-001 | protein_coding | Homo_sapiens | 0.00000002 | 66 |
ENST00000370536 | SOX3-001 | protein_coding | Homo_sapiens | 0 | 313 |
ENST00000376945 | SOX21-001 | protein_coding | Homo_sapiens | 0 | 318 |
ENST00000396884 | SOX10-002 | protein_coding | Homo_sapiens | 0.00000002 | 66 |
ENST00000427770 | SOX10-003 | protein_coding | Homo_sapiens | 0.000000007 | 66 |