C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002SE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000027109-ENSDARG00000007720 CGP 7955 5:42743318-42769912
GeneTranscriptPositionBiotype
ENSDARG00000007720 (sub1b)
SUB1 homolog b (S. cerevisiae) 		ENSDART00000011229 (sub1b-001) 42762145-42769912 protein_coding
ENSDARG00000027109 (zfr)
zinc finger RNA binding protein 		ENSDART00000074789 (zfr-001) 42743318-42761350 protein_coding
ENSDART00000129415 (zfr-201) 42744743-42761331 protein_coding
ENSDART00000130579 (zfr-002) 42751927-42761350 processed_transcript
ENSDART00000134891 (zfr-003) 42743337-42761348 processed_transcript
ENSDART00000136451 (zfr-004) 42744831-42747500 processed_transcript
CIL_0002SE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000056097-ENSG00000113387 CGP 9606 5:32354350-32604079
GeneTranscriptPositionBiotype
ENSG00000056097 (ZFR)
zinc finger RNA binding protein 		ENST00000265069 (ZFR-001) 32354350-32444761 protein_coding
ENST00000502988 (ZFR-007) 32354629-32364938 retained_intron
ENST00000505204 (ZFR-008) 32419820-32444496 retained_intron
ENST00000505366 (ZFR-002) 32406727-32444738 retained_intron
ENST00000507465 (ZFR-004) 32355648-32390317 nonsense_mediated_decay
ENST00000510369 (ZFR-005) 32354852-32383819 processed_transcript
ENST00000514356 (ZFR-006) 32354351-32380424 retained_intron
ENST00000616882 (ZFR-201) 32406877-32444738 protein_coding
ENSG00000113387 (SUB1)
SUB1 homolog (S. cerevisiae) 		ENST00000265073 (SUB1-001) 32585499-32604079 protein_coding
ENST00000502453 (SUB1-005) 32594923-32601130 retained_intron
ENST00000502897 (SUB1-007) 32585588-32601150 protein_coding
ENST00000504016 (SUB1-015) 32588537-32601342 processed_transcript
ENST00000504789 (SUB1-008) 32585887-32601257 processed_transcript
ENST00000506237 (SUB1-011) 32531633-32601323 protein_coding
ENST00000510442 (SUB1-009) 32585600-32591687 protein_coding
ENST00000511175 (SUB1-014) 32591248-32601093 retained_intron
ENST00000511615 (SUB1-004) 32585559-32601988 nonsense_mediated_decay
ENST00000511988 (SUB1-010) 32586114-32591685 retained_intron
ENST00000512913 (SUB1-012) 32531818-32601200 protein_coding
ENST00000513013 (SUB1-013) 32531849-32601055 processed_transcript
ENST00000515355 (SUB1-006) 32585571-32601282 protein_coding
ENSG00000207956 (MIR579)
microRNA 579 		ENST00000385221 (MIR579-201) 32394378-32394475 miRNA
ENSG00000249142 (CTD-2290P7.1)
 ENST00000503901 (CTD-2290P7.1-001) 32522758-32523865 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SE_0001ENSDARG00000007720ENSDART00000011229ENSDARG00000027109ENSDART00000074789ENSDART00000129415ENSDART00000130579ENSDART00000134891ENSDART00000136451CIL_0002SE_0002ENSG00000056097ENST00000265069ENST00000502988ENST00000505204ENST00000505366ENST00000507465ENST00000510369ENST00000514356ENST00000616882ENSG00000113387ENST00000265073ENST00000502453ENST00000502897ENST00000504016ENST00000504789ENST00000506237ENST00000510442ENST00000511175ENST00000511615ENST00000511988ENST00000512913ENST00000513013ENST00000515355ENSG00000207956ENST00000385221ENSG00000249142ENST00000503901
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SE_0001ENSDARG00000007720ENSDART00000011229ENSDARG00000027109ENSDART00000074789ENSDART00000129415ENSDART00000134891CIL_0002SE_0002ENSG00000056097ENST00000265069ENST00000507465ENSG00000113387ENST00000265073ENST00000502453ENST00000502897ENST00000504016ENST00000504789ENST00000506237ENST00000511615ENST00000515355ENSG00000207956ENST00000385221ENSG00000249142ENST00000503901
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007720 ENSDART00000011229 N/A N/A N/A 110.123±27.66 N/A N/A 63.186±12.63 30.598±3.66 1.912±0.00 N/A 21.696±0.00 N/A N/A N/A
ENSDARG00000027109 ENSDART00000074789 N/A N/A N/A 36.919±21.11 N/A N/A 12.817±6.33 2.607±0.00 1.588±0.00 N/A 5.186±0.00 N/A N/A N/A
ENSDART00000129415 N/A N/A N/A N/A N/A N/A N/A N/A 0.827±0.00 N/A 1.684±0.00 N/A N/A N/A
ENSDART00000130579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134891 N/A N/A N/A N/A N/A N/A 25.125±0.05 24.819±3.57 N/A N/A N/A N/A N/A N/A
ENSDART00000136451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000056097 ENST00000265069 13.459±0.00 13.703±0.00 5.306±0.00 15.816±10.80 13.592±2.99 12.900±8.18 8.322±5.83 11.769±7.82 8.183±2.83 9.639±0.00 7.467±5.46 13.109±5.39 10.626±0.78 10.140±5.78
ENST00000502988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507465 8.523±0.00 N/A N/A 29.433±0.00 N/A N/A N/A 3.750±0.00 N/A N/A 4.614±0.00 13.521±7.39 15.004±0.00 18.789±3.74
ENST00000510369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000113387 ENST00000265073 6.940±0.00 10.061±0.00 2.547±0.00 35.035±3.14 14.174±2.50 7.644±0.48 8.141±0.98 5.717±1.64 7.082±3.93 7.013±0.57 4.591±0.78 10.783±1.64 7.487±2.80 8.076±1.53
ENST00000502453 N/A N/A 0.895±0.00 N/A N/A N/A N/A N/A N/A 1.474±0.00 N/A N/A N/A N/A
ENST00000502897 15.591±0.00 N/A N/A 36.558±0.00 48.303±19.23 24.143±3.81 9.890±0.00 23.716±0.67 12.908±0.00 30.611±0.00 N/A 26.008±0.00 N/A N/A
ENST00000504016 N/A 32.685±0.00 N/A N/A 45.201±0.00 23.870±0.00 18.615±0.00 24.708±0.00 15.260±0.00 28.159±0.00 N/A N/A N/A 37.401±0.00
ENST00000504789 25.157±0.00 32.270±0.00 N/A N/A N/A 36.639±0.00 34.515±0.00 51.553±0.00 30.678±0.00 55.803±0.00 16.226±0.00 79.987±8.45 42.355±9.19 42.204±10.05
ENST00000506237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.501±0.00 N/A N/A
ENST00000510442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511615 4.853±0.00 9.669±0.00 1.598±0.00 N/A N/A 5.423±0.00 N/A 3.447±0.00 N/A N/A N/A 18.024±6.97 6.967±1.66 9.628±1.03
ENST00000511988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515355 N/A N/A 5.216±0.00 N/A N/A N/A N/A N/A N/A 9.672±0.00 N/A N/A N/A N/A
ENSG00000207956 ENST00000385221 N/A N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249142 ENST00000503901 0.014±0.00 N/A N/A N/A 0.222±0.11 0.014±0.00 N/A N/A N/A N/A 0.013±0.00 N/A 0.027±0.00 0.082±0.00

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