C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ryanodine receptor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000077838 ryr3-201 ENSDARG00000071331 7955 - 20:29298896-29305325 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENSDART00000077838
Transcript ID Heart Muscle
ENSDART00000077838 12.187±0.00 185.228±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HM CIL_0003HM_0001 CGP 20:29254245-29295270
CIL_000222 CIL_000222_0001 CGP 20:29257464-29446621

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005219 IEA ryanodine-sensitive calcium-release channel activity
GO:0006811 IEA ion transport
GO:0006874 IEA cellular calcium ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355481 RYR1-001 protein_coding Homo_sapiens 0 433
ENST00000359596 RYR1-010 protein_coding Homo_sapiens 0 433
ENST00000360985 RYR1-201 protein_coding Homo_sapiens 0 433
ENST00000389232 RYR3-001 protein_coding Homo_sapiens 0 660
ENST00000415757 RYR3-002 protein_coding Homo_sapiens 0 660
ENST00000622037 RYR3-201 protein_coding Homo_sapiens 0 660

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