C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, U
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000083939 PTPRU (3 of 3)-202 ENSDARG00000094911 7955 + 16:37780706-37948692 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000083939
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000083939 0.737±0.94 0.050±0.00 0.090±0.00 0.006±0.00 0.501±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030741 Ptpru-003 protein_coding Mus_musculus 0 196
ENSMUST00000097860 Ptpru-004 protein_coding Mus_musculus 0 196
ENSMUST00000105987 Ptpru-001 protein_coding Mus_musculus 0 196
ENSMUST00000127633 Ptpru-002 processed_transcript Mus_musculus 0 196
ENST00000345512 PTPRU-003 protein_coding Homo_sapiens 0 483
ENST00000373779 PTPRU-001 protein_coding Homo_sapiens 0 741
ENST00000428026 PTPRU-008 protein_coding Homo_sapiens 0 741
ENST00000460170 PTPRU-002 protein_coding Homo_sapiens 0 704

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