C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family A, member 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000085661 apba2b-201 ENSDARG00000060639 7955 + 7:32203507-32251157 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENSDART00000085661
Transcript ID Heart Liver
ENSDART00000085661 0.301±0.07 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CR CIL_0007CR_0001 CGP 7:32116293-32251157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032732 Apba2-001 protein_coding Mus_musculus 0 1116
ENSMUST00000107507 Apba2-002 protein_coding Mus_musculus 0 222
ENST00000382938 APBA2-006 retained_intron Homo_sapiens 2.00386e-43 182
ENST00000411764 APBA2-201 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000558259 APBA2-202 protein_coding Homo_sapiens 0 1147
ENST00000558330 APBA2-002 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000558402 APBA2-001 protein_coding Homo_sapiens 0 1147
ENST00000559814 APBA2-003 retained_intron Homo_sapiens 2.00386e-43 182
ENST00000561069 APBA2-004 protein_coding Homo_sapiens 0 1147
ENST00000612449 APBA2-203 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000620457 APBA2-204 protein_coding Homo_sapiens 0 1147

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