C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, beta 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000087280 cacnb3a-001 ENSDARG00000001881 7955 + 23:14209498-14292297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087280
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087280 0.347±0.00 0.023±0.00 0.079±0.00 0.016±0.00 0.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DH CIL_0003DH_0001 CGP 23:14052948-14292297
CIL_0003DO CIL_0003DO_0001 CGP 23:14209498-14328496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005515 IEA protein binding
GO:0005891 IEA voltage-gated calcium channel complex
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017552 Cacnb1-001 protein_coding Mus_musculus 0 327
ENSMUST00000092736 Cacnb1-002 protein_coding Mus_musculus 0 316
ENSMUST00000103144 Cacnb1-201 protein_coding Mus_musculus 0 316
ENSMUST00000107561 Cacnb1-003 protein_coding Mus_musculus 0 316
ENSMUST00000107562 Cacnb1-004 protein_coding Mus_musculus 0 327
ENSMUST00000135462 Cacnb1-006 processed_transcript Mus_musculus 4.00001e-41 172

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