C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135462 Cacnb1-006 ENSMUSG00000020882 10090 - 11:98009625-98023034 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_0000TK CIL_0000TK_0003 CGP 11:97989578-98023034
CIL_0000TJ CIL_0000TJ_0003 CGP 11:98001508-98030492

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000087280 cacnb3a-001 protein_coding Danio_rerio 4.00001e-41 172
ENST00000344140 CACNB1-002 protein_coding Homo_sapiens 0 813
ENST00000394303 CACNB1-001 protein_coding Homo_sapiens 0 985
ENST00000394310 CACNB1-004 protein_coding Homo_sapiens 0 985
ENST00000492737 CACNB1-003 processed_transcript Homo_sapiens 0 606
ENST00000536613 CACNB1-012 retained_intron Homo_sapiens 0 691
ENST00000539338 CACNB1-005 retained_intron Homo_sapiens 0 867
ENST00000577582 CACNB1-011 processed_transcript Homo_sapiens 0 544
ENST00000582877 CACNB1-009 processed_transcript Homo_sapiens 0 728
ENST00000622445 CACNB1-201 protein_coding Homo_sapiens 0 1072

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